Basic Information | |
---|---|
Species | Prunus persica |
Cazyme ID | ppa004088m |
Family | GT5 |
Protein Properties | Length: 532 Molecular Weight: 59464.5 Isoelectric Point: 7.9146 |
Chromosome | Chromosome/Scaffold: 6 Start: 11800476 End: 11808740 |
Description | starch synthase 4 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT5 | 114 | 521 | 0 |
HIIHVTAEMAPIAKVGGLGDVVTGLARACLSRGHRVDIMLPFYGCIQREQIDDLTLITTYNSYHDGKWIPTHAYSGTVSGIPVIFIEPSHQFFKGQHVYG GSYNELEAYLFFSRACLEWMQVTGTQPDIIHVHEWQTGALPLLYWDMYHYLSLQKPRIVLTIHNMEHYGECRQEQLNMCGLDGSLYATFDKAVDDRTVGH NPERLSLLKGGIVYSNAVVTVSPTYLKETLCSGWLSNTLIRHRDKYVGIVNGIDTAMWNPSTDVFLPSKFHAQNFEGKKLCKYYVQRGLGLASGNHVPDT ALKVPLVVCITRLVAQKGLHLIIHAIKQVEELGGQMVILGKAPDSRVESEFEGLVNLHNQGQSIRILLMYSEELSHLLYAAADFILVPSMYEPCGLAQMI GMRYGAVC |
Full Sequence |
---|
Protein Sequence Length: 532 Download |
MRVKMECATA GRFFGPSSSR LSNPRRRRRI VLNRNNGLSA HNLCSSSKFK IQAQTHLSSE 60 VGIAKQGSLT DFGIQEFVWP SPTDEIPFWK KGFPSWDANL EVPSEVKKDS KLMHIIHVTA 120 EMAPIAKVGG LGDVVTGLAR ACLSRGHRVD IMLPFYGCIQ REQIDDLTLI TTYNSYHDGK 180 WIPTHAYSGT VSGIPVIFIE PSHQFFKGQH VYGGSYNELE AYLFFSRACL EWMQVTGTQP 240 DIIHVHEWQT GALPLLYWDM YHYLSLQKPR IVLTIHNMEH YGECRQEQLN MCGLDGSLYA 300 TFDKAVDDRT VGHNPERLSL LKGGIVYSNA VVTVSPTYLK ETLCSGWLSN TLIRHRDKYV 360 GIVNGIDTAM WNPSTDVFLP SKFHAQNFEG KKLCKYYVQR GLGLASGNHV PDTALKVPLV 420 VCITRLVAQK GLHLIIHAIK QVEELGGQMV ILGKAPDSRV ESEFEGLVNL HNQGQSIRIL 480 LMYSEELSHL LYAAADFILV PSMYEPCGLA QMIGMRYGAV CTSIGQLYPT I* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02316 | PLN02316 | 6.0e-101 | 113 | 531 | 426 | + synthase/transferase | ||
PRK00654 | glgA | 2.0e-127 | 113 | 520 | 413 | + glycogen synthase; Provisional | ||
PLN02939 | PLN02939 | 7.0e-138 | 113 | 520 | 414 | + transferase, transferring glycosyl groups | ||
TIGR02095 | glgA | 4.0e-139 | 113 | 531 | 425 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-148 | 114 | 521 | 415 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACD13790.1 | 0 | 50 | 520 | 71 | 527 | starch synthase VI precursor [Solanum lycopersicum] |
GenBank | ACD13791.1 | 0 | 41 | 520 | 42 | 520 | starch synthase VI precursor [Vitis vinifera] |
GenBank | ACL36485.1 | 0 | 75 | 520 | 117 | 567 | starch synthase VI precursor [Picea glauca] |
RefSeq | XP_002268126.1 | 0 | 41 | 520 | 42 | 520 | PREDICTED: starch synthase VI [Vitis vinifera] |
RefSeq | XP_002331426.1 | 0 | 5 | 520 | 3 | 530 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d1j_A | 0 | 113 | 520 | 1 | 392 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 1.4013e-45 | 113 | 520 | 1 | 392 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 1.4013e-45 | 113 | 520 | 1 | 392 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4t_A | 1.4013e-45 | 113 | 520 | 1 | 392 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2qzs_A | 1.4013e-45 | 113 | 520 | 1 | 392 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EX373959 | 300 | 187 | 481 | 0 |
DV438199 | 262 | 38 | 299 | 0 |
GE474726 | 265 | 135 | 399 | 0 |
CO474248 | 254 | 133 | 386 | 0 |
DV993959 | 263 | 136 | 398 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|