y
Basic Information | |
---|---|
Species | Prunus persica |
Cazyme ID | ppa004116m |
Family | GH14 |
Protein Properties | Length: 530 Molecular Weight: 58481.9 Isoelectric Point: 6.3642 |
Chromosome | Chromosome/Scaffold: 1 Start: 10744696 End: 10747638 |
Description | beta-amylase 3 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH14 | 82 | 487 | 0 |
FVGLPLDTVSDCNAVNHARAIAAGLKALKLLGVEGVELPVWWGVVEKEAMGKYEWSGYLAVAEMVQKAGLELHVSLCFHASKQPKISLPEWVSRLGESQP NIFFKDRSGQQYKECLSLAVDELPVLNGKTPIQVYHDFCESFKSSFTPFLGSTITGISMSLGPDGELQYPSHHRLVKNKIPGVGEFQCYDESMLSNLKQH AEATGNPLWGLGGPHDVPNYDQSPNSSNFFKDHGGSWESPYGDYFLSWYSNQLISHGDRLLSLASSTFTDAEVTIYGKVPLIHSWYKTRSHASELTSGFY NTSSRDGYEAVAQMFARNSCKIILPGMDLSDEHQPQDSLSSPELLLSQITTACRKHGVEIAGQNSSVSGGRGGFQQIKKNLMGENVMDLFTYQRMGADFF SPEHFP |
Full Sequence |
---|
Protein Sequence Length: 530 Download |
MEVSVFRSSQ ATVGKAELAR TELGFCKLNG NLKTNICFGQ STTWKNARLQ LTVRAVQSEA 60 VRSDKVSGPA RRCKQNDGVR LFVGLPLDTV SDCNAVNHAR AIAAGLKALK LLGVEGVELP 120 VWWGVVEKEA MGKYEWSGYL AVAEMVQKAG LELHVSLCFH ASKQPKISLP EWVSRLGESQ 180 PNIFFKDRSG QQYKECLSLA VDELPVLNGK TPIQVYHDFC ESFKSSFTPF LGSTITGISM 240 SLGPDGELQY PSHHRLVKNK IPGVGEFQCY DESMLSNLKQ HAEATGNPLW GLGGPHDVPN 300 YDQSPNSSNF FKDHGGSWES PYGDYFLSWY SNQLISHGDR LLSLASSTFT DAEVTIYGKV 360 PLIHSWYKTR SHASELTSGF YNTSSRDGYE AVAQMFARNS CKIILPGMDL SDEHQPQDSL 420 SSPELLLSQI TTACRKHGVE IAGQNSSVSG GRGGFQQIKK NLMGENVMDL FTYQRMGADF 480 FSPEHFPLFS KFVWTLNQPA LQSDDLPIEE EIVESVHSNS ESVIHMQAA* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 1.0e-88 | 114 | 501 | 402 | + beta-amylase | ||
PLN02161 | PLN02161 | 9.0e-100 | 79 | 493 | 433 | + beta-amylase | ||
PLN02801 | PLN02801 | 6.0e-104 | 79 | 493 | 430 | + beta-amylase | ||
PLN00197 | PLN00197 | 2.0e-115 | 59 | 498 | 453 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 1.0e-122 | 58 | 493 | 450 | + beta-amylase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD38148.1 | 0 | 80 | 529 | 1 | 450 | AF139501_1 beta-amylase [Prunus armeniaca] |
EMBL | CAI39245.1 | 0 | 1 | 529 | 1 | 536 | beta-amylase [Glycine max] |
EMBL | CAN66037.1 | 0 | 1 | 529 | 1 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276777.1 | 0 | 1 | 529 | 1 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002516865.1 | 0 | 1 | 529 | 1 | 545 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v3i_A | 0 | 79 | 493 | 12 | 438 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 79 | 493 | 12 | 438 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1q6d_A | 0 | 79 | 493 | 12 | 438 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1wds_A | 0 | 79 | 493 | 12 | 438 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
PDB | 1wdp_A | 0 | 79 | 493 | 12 | 438 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EG631213 | 353 | 178 | 530 | 0 |
HO781436 | 405 | 127 | 530 | 0 |
HO796964 | 390 | 142 | 530 | 0 |
EG631208 | 294 | 237 | 530 | 0 |
HO781436 | 118 | 20 | 133 | 3e-24 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|