Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa004290m |
Family | GH10 |
Protein Properties | Length: 519 Molecular Weight: 58045.4 Isoelectric Point: 5.7357 |
Chromosome | Chromosome/Scaffold: 8 Start: 16318818 End: 16321514 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 173 | 453 | 0 |
VSKDFPFGSAIAKTILGNLPYQNWFVKRFNAAVFENELKWYATEPEQGKTNYTIADQMLQFVRANQITARGHNIFWEDPKYTPAWVRNLTGNELHSAVNS RIESLMSKYREEFIHWDVSNEMLHFDFYEQKLGPNATLHFFETAHKFDPLATLFMNDFNVVETCSDVNSTVDAYISRLRELRYGGALMDGIGLEGHFIVP NPPLIRAILDKLATLSLPIWLTEVDISSTLGKEAQAIYLEQVLREGFSHPSVNGIMLWTALHPNGCYQMCLTDNNLQNLPA |
Full Sequence |
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Protein Sequence Length: 519 Download |
MQPGAALYGG GIINDQASGA EGSLGNSATT SSGVYSPSFI LHNLSQGTIY CFSSWVKIEG 60 AGSALIRASL KTEKETYDCI GTVLAKHGCW SFLKGGFVLN SPSQLSMLFF QNTDDRDVNI 120 EIASSSLQPF SVQQWRTYQQ YIINTKRKRA VTVHVSNEQG KRLQGVTINI EQVSKDFPFG 180 SAIAKTILGN LPYQNWFVKR FNAAVFENEL KWYATEPEQG KTNYTIADQM LQFVRANQIT 240 ARGHNIFWED PKYTPAWVRN LTGNELHSAV NSRIESLMSK YREEFIHWDV SNEMLHFDFY 300 EQKLGPNATL HFFETAHKFD PLATLFMNDF NVVETCSDVN STVDAYISRL RELRYGGALM 360 DGIGLEGHFI VPNPPLIRAI LDKLATLSLP IWLTEVDISS TLGKEAQAIY LEQVLREGFS 420 HPSVNGIMLW TALHPNGCYQ MCLTDNNLQN LPAGDVVDKL LKEWQTGEIE GETDDHGSYS 480 FFGFLGEYKV SVKYGNKTSS STFSLCQGEE TRHVSIQL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 6.0e-36 | 175 | 399 | 240 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 3.0e-59 | 174 | 430 | 273 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 2.0e-78 | 210 | 457 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94920.1 | 0 | 2 | 518 | 50 | 563 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI37893.1 | 0 | 7 | 518 | 120 | 625 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195577.2 | 0 | 7 | 518 | 50 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002277675.1 | 0 | 7 | 518 | 44 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002534153.1 | 0 | 51 | 518 | 6 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v6y_A | 9e-28 | 179 | 430 | 16 | 275 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 1nq6_A | 1e-27 | 179 | 430 | 15 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1v0n_A | 1e-26 | 179 | 430 | 16 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1v0m_A | 1e-26 | 179 | 430 | 16 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1v0l_A | 1e-26 | 179 | 430 | 16 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES803339 | 253 | 164 | 416 | 0 |
GO498667 | 216 | 252 | 467 | 0 |
CX705541 | 238 | 282 | 519 | 0 |
DY024035 | 263 | 233 | 492 | 0 |
GR953916 | 292 | 153 | 444 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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