y
Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa004964m |
Family | CBM43 |
Protein Properties | Length: 484 Molecular Weight: 52682.1 Isoelectric Point: 7.0481 |
Chromosome | Chromosome/Scaffold: 1 Start: 179783 End: 183519 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 364 | 445 | 1.3e-24 |
WCVMKPSANLDDPQVALSVSYACGLADCTSLGYGTSCGSLDARGNISYAVNSYYQRNNQLDVACKFPNLSMITKTNPSVGSC | |||
GH17 | 23 | 342 | 0 |
IGANWGTQASHPLPPDTVVRLLRENGIRKVKLFDADYDTLRSLGKSEGVEVMVGIPNDMLASLATSVKAAEKWVSKNVSAHVSSSNVKIRYVAVGNEPFL ETYNGSFLRTTFPALQNVQSALIKAGLSNQVKVTVPLNADVYASSNGLPSGGDFRTDIHGLMLQIVKFLSDNGAPFTVNIYPFISLYIDSNFPVDYAFFD GNASPITDGSLTYYNMFDANYDTLVWALQRNGFGNLPIIVGEIGWPTDGDQNANIVYAQRFNQGFMSHILGGRGTPMRPGPIDAYLFSLIDEDAKSIDPG NFERHWGIFTFDGIAKYQLN |
Full Sequence |
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Protein Sequence Length: 484 Download |
MRWFSVGIKV VCLVSMMCTV SGIGANWGTQ ASHPLPPDTV VRLLRENGIR KVKLFDADYD 60 TLRSLGKSEG VEVMVGIPND MLASLATSVK AAEKWVSKNV SAHVSSSNVK IRYVAVGNEP 120 FLETYNGSFL RTTFPALQNV QSALIKAGLS NQVKVTVPLN ADVYASSNGL PSGGDFRTDI 180 HGLMLQIVKF LSDNGAPFTV NIYPFISLYI DSNFPVDYAF FDGNASPITD GSLTYYNMFD 240 ANYDTLVWAL QRNGFGNLPI IVGEIGWPTD GDQNANIVYA QRFNQGFMSH ILGGRGTPMR 300 PGPIDAYLFS LIDEDAKSID PGNFERHWGI FTFDGIAKYQ LNLGSTNSGS LVPAKGVHYL 360 ERKWCVMKPS ANLDDPQVAL SVSYACGLAD CTSLGYGTSC GSLDARGNIS YAVNSYYQRN 420 NQLDVACKFP NLSMITKTNP SVGSCRFEIM IEPYYGGAGR RFGCLQKPLS LVALIIFFSL 480 TVV* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-6 | 207 | 334 | 131 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-14 | 363 | 429 | 74 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-30 | 363 | 447 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-76 | 23 | 342 | 323 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38945.1 | 0 | 1 | 483 | 1 | 483 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273826.1 | 0 | 1 | 483 | 83 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309034.1 | 0 | 23 | 458 | 4 | 439 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331390.1 | 0 | 13 | 460 | 1 | 451 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530371.1 | 0 | 1 | 483 | 1 | 482 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 23 | 331 | 1 | 294 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1aq0_B | 0 | 23 | 331 | 1 | 294 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 23 | 331 | 1 | 294 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 23 | 343 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 23 | 343 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |