y
Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa005142m |
Family | CBM43 |
Protein Properties | Length: 476 Molecular Weight: 51195.9 Isoelectric Point: 5.4466 |
Chromosome | Chromosome/Scaffold: 5 Start: 864976 End: 866859 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 388 | 470 | 2.6e-31 |
WCVAKPHADEKVLQAVLDFCCGGGGVDCREIYENGDCFEPQKLLAHASYAMNAYYQMHGRNYWNCDFKGTGLVTFSDPTYGRC | |||
GH17 | 25 | 355 | 0 |
VGINYGTLGNNLPSPKRVAQLLQATLIDKVKIYDTNPEILQAFSNTGIDLIVAVENSHVSNISTDVAAADEWFATRVLPFIPATSITAIAVGNEYLTTTT AATKSDKDPQVDPTALVQAMQNLHAVLIARGLERKIKVTTPHSMAVLASSFPPSSSTFATNLVPTMTSIAAFLADTGAPFMVNAYPYFAYRDNPDMVNLQ YALLGNSTSNGVRDPKGYTYTNMLDAQIDAVRAAIDALGLGHRTVEIMVSESGWPSKGDTGDIAATPENAKTYNTRLIERAQSNKGTPMKPNDKVEVFVF ALFNENKKEGGATERNFGIFNGDGSKVYEVD |
Full Sequence |
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Protein Sequence Length: 476 Download |
MATTTLPLLL LVIVSSFQNA VVSGVGINYG TLGNNLPSPK RVAQLLQATL IDKVKIYDTN 60 PEILQAFSNT GIDLIVAVEN SHVSNISTDV AAADEWFATR VLPFIPATSI TAIAVGNEYL 120 TTTTAATKSD KDPQVDPTAL VQAMQNLHAV LIARGLERKI KVTTPHSMAV LASSFPPSSS 180 TFATNLVPTM TSIAAFLADT GAPFMVNAYP YFAYRDNPDM VNLQYALLGN STSNGVRDPK 240 GYTYTNMLDA QIDAVRAAID ALGLGHRTVE IMVSESGWPS KGDTGDIAAT PENAKTYNTR 300 LIERAQSNKG TPMKPNDKVE VFVFALFNEN KKEGGATERN FGIFNGDGSK VYEVDLSCKF 360 CSNDGNGNGG GFGFGEKVSG VIRGPSVWCV AKPHADEKVL QAVLDFCCGG GGVDCREIYE 420 NGDCFEPQKL LAHASYAMNA YYQMHGRNYW NCDFKGTGLV TFSDPTYGRC RYPQQ* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-6 | 205 | 347 | 146 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-20 | 388 | 458 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-36 | 388 | 472 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-91 | 25 | 355 | 331 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40742.1 | 0 | 22 | 475 | 46 | 485 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_001761806.1 | 0 | 25 | 466 | 34 | 451 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002272900.1 | 0 | 22 | 475 | 21 | 460 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300634.1 | 0 | 15 | 356 | 12 | 341 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510704.1 | 0 | 22 | 475 | 20 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 25 | 356 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 25 | 356 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 25 | 356 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 25 | 356 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 25 | 356 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |