Basic Information | |
---|---|
Species | Prunus persica |
Cazyme ID | ppa005976m |
Family | CE8 |
Protein Properties | Length: 435 Molecular Weight: 48286.4 Isoelectric Point: 9.8971 |
Chromosome | Chromosome/Scaffold: 7 Start: 18779860 End: 18782641 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 140 | 423 | 0 |
ITVKKDGTGDFKTVTDAVNSIPSWNKRRVVVFIDGGEYREKILVDVSRPFVTFYGDKNDVPSITFDGTALKYGTWDSATVAIEADYFVAVNIAFVNSAPM PDGKRPGAQAVAMRISGDKAAFHSCRFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLNNRIHSVANGMGVITAHAREDAADDSGFAFVHCNIT GTGDTFLGRAWRDRARVVFAYTYMGSLIDSQGWSDAKHSERDKTVYYGEYKCMGPGSSSTGRVKYAKMLSDEEAKPFLSMTFIR |
Full Sequence |
---|
Protein Sequence Length: 435 Download |
MSSAKPMKRS PSTSARIALC LYVSFSVPPI KPFPSINQSI KSHQTSIFKT SKTHNTQKKP 60 KNSLMAPFLA PNLITIIMIT IITTSPQLVL THPNLIPPHL SQLDTWIVHN MRDYANRKAT 120 QVTLRFDSKL LSAEYAFKII TVKKDGTGDF KTVTDAVNSI PSWNKRRVVV FIDGGEYREK 180 ILVDVSRPFV TFYGDKNDVP SITFDGTALK YGTWDSATVA IEADYFVAVN IAFVNSAPMP 240 DGKRPGAQAV AMRISGDKAA FHSCRFIGFQ DTLCDDRGRH FFKDCYIQGT VDFIFGNGKS 300 LYLNNRIHSV ANGMGVITAH AREDAADDSG FAFVHCNITG TGDTFLGRAW RDRARVVFAY 360 TYMGSLIDSQ GWSDAKHSER DKTVYYGEYK CMGPGSSSTG RVKYAKMLSD EEAKPFLSMT 420 FIRGTKWVLP PPKL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 4.0e-100 | 138 | 430 | 301 | + probable pectinesterase | ||
PLN02304 | PLN02304 | 2.0e-102 | 139 | 430 | 301 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 7.0e-103 | 108 | 428 | 335 | + pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-118 | 139 | 430 | 299 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 85 | 434 | 352 | + pectinesterase family protein |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27759.1 | 0 | 86 | 432 | 39 | 388 | unnamed protein product [Vitis vinifera] |
EMBL | CBI38547.1 | 0 | 69 | 434 | 1 | 365 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277518.1 | 0 | 86 | 432 | 27 | 376 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326144.1 | 0 | 74 | 434 | 10 | 374 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516214.1 | 0 | 64 | 434 | 4 | 378 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.4013e-45 | 140 | 428 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.4013e-45 | 142 | 428 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-17 | 150 | 416 | 18 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-17 | 150 | 416 | 18 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-17 | 150 | 416 | 18 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |