Basic Information | |
---|---|
Species | Prunus persica |
Cazyme ID | ppa006779m |
Family | CE8 |
Protein Properties | Length: 396 Molecular Weight: 43386 Isoelectric Point: 7.6854 |
Chromosome | Chromosome/Scaffold: 3 Start: 14685185 End: 14687061 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 94 | 385 | 0 |
CVDRNGCCNFTLVQAAVDAAPALSQKRTIIWINNGIYYEKILIPKNKPNITFQGQGYESTAIAWNDTANSSHGTFYSGSVQVFADNFVAKNISFMNLAPI PKPGDFGAQAVAIRISGDQAAFLGCGFFGAQDTLHDDKGRHYFKDCYVQGSIDFIFGNGRSLYENCQLISIANPLPPESRNVNGAITAHGRTSKDDNTGF AFVNCFIGGTGRVWLGRAWRPFSRVVFVNTIMADIIAPEGWNDFNDPTRDQTIFYGEYNCSGAGANMTMRAPFVQKLNDTEASTFLNVSWID |
Full Sequence |
---|
Protein Sequence Length: 396 Download |
MSLKTTCLTY FVAIFAVLLA SRRVIDPNSS PLKHIVDLSL ATTSSVPSNI ISYLIPNHIG 60 RHHKKKDNGT LGSICDDFPR GVPPPDTNKT SYLCVDRNGC CNFTLVQAAV DAAPALSQKR 120 TIIWINNGIY YEKILIPKNK PNITFQGQGY ESTAIAWNDT ANSSHGTFYS GSVQVFADNF 180 VAKNISFMNL APIPKPGDFG AQAVAIRISG DQAAFLGCGF FGAQDTLHDD KGRHYFKDCY 240 VQGSIDFIFG NGRSLYENCQ LISIANPLPP ESRNVNGAIT AHGRTSKDDN TGFAFVNCFI 300 GGTGRVWLGR AWRPFSRVVF VNTIMADIIA PEGWNDFNDP TRDQTIFYGE YNCSGAGANM 360 TMRAPFVQKL NDTEASTFLN VSWIDGGDWL QRNIN* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 4.0e-97 | 95 | 391 | 297 | + putative pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-102 | 31 | 390 | 371 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-109 | 95 | 390 | 297 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 6.0e-124 | 93 | 391 | 306 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 0 | 25 | 391 | 369 | + probable pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08648.1 | 0 | 1 | 391 | 1 | 388 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_172023.1 | 0 | 73 | 391 | 71 | 389 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002267842.1 | 0 | 1 | 391 | 1 | 394 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323171.1 | 0 | 19 | 395 | 1 | 380 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521065.1 | 0 | 67 | 391 | 68 | 392 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 93 | 391 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4.00001e-40 | 94 | 391 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 7e-22 | 103 | 389 | 18 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 7e-22 | 103 | 389 | 18 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 7e-22 | 103 | 389 | 18 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |