Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa007533m |
Family | CE8 |
Protein Properties | Length: 365 Molecular Weight: 39542.8 Isoelectric Point: 9.2904 |
Chromosome | Chromosome/Scaffold: 2 Start: 23805146 End: 23806705 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 67 | 351 | 0 |
KVMKNGSGQFKTITDAVNSIPAGNTKRVIVYIGGGEYNEKITIPRNKPFVTFYGSPTNMPTLTFAGTSQKYGTVNSATVIAESDYFVAANVIIKNSSPRP DGKRVGAQAVALRVSGNKSALYNCKLIGFQDTLCDDRGNHLFKDCFIEGTVDFIWGSGKSLYLNTELHVLGDNGLTVITAQARDSASEDTGYSFVHCKIT GTGSGTYLGRAWRTNPMVVYAYTSMTKVINPAGWSDNNHPERDSTVFYGEYKCSGPGSSAVGREKYTKHLTDEQIKPFLSLGYIQ |
Full Sequence |
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Protein Sequence Length: 365 Download |
MGVNAALTMT LILFTATIAM ADDHTPVPAD QSQVNTWFNN NVKPYTARRG TLDPTLAKAE 60 ASQKVIKVMK NGSGQFKTIT DAVNSIPAGN TKRVIVYIGG GEYNEKITIP RNKPFVTFYG 120 SPTNMPTLTF AGTSQKYGTV NSATVIAESD YFVAANVIIK NSSPRPDGKR VGAQAVALRV 180 SGNKSALYNC KLIGFQDTLC DDRGNHLFKD CFIEGTVDFI WGSGKSLYLN TELHVLGDNG 240 LTVITAQARD SASEDTGYSF VHCKITGTGS GTYLGRAWRT NPMVVYAYTS MTKVINPAGW 300 SDNNHPERDS TVFYGEYKCS GPGSSAVGRE KYTKHLTDEQ IKPFLSLGYI QGSKWLLPPP 360 NPKV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 4.0e-86 | 65 | 356 | 292 | + putative pectinesterase | ||
PLN02671 | PLN02671 | 2.0e-86 | 39 | 356 | 334 | + pectinesterase | ||
PLN02304 | PLN02304 | 5.0e-89 | 68 | 358 | 301 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 4.0e-110 | 65 | 358 | 302 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 1 | 361 | 361 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38547.1 | 0 | 3 | 360 | 6 | 363 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309337.1 | 0 | 9 | 361 | 15 | 368 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 1 | 361 | 1 | 364 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321778.1 | 0 | 3 | 361 | 6 | 362 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333446.1 | 0 | 9 | 361 | 12 | 365 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 9.99995e-41 | 66 | 356 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-35 | 68 | 356 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-20 | 76 | 233 | 18 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-20 | 76 | 233 | 18 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-20 | 76 | 233 | 18 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |