y
Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa010695m |
Family | CBM43 |
Protein Properties | Length: 240 Molecular Weight: 23354.7 Isoelectric Point: 4.8344 |
Chromosome | Chromosome/Scaffold: 5 Start: 16372136 End: 16375890 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 22 | 103 | 3.9e-31 |
WCVCKEGLGDAVWQKTLDYACGAGADCNPIHSNGGCYNPNTVKAHCNYAVNSYFQKKGQAQGSCDFAGTANPVTSDPSITGC |
Full Sequence |
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Protein Sequence Length: 240 Download |
MAVLAFAALL LLAMAGQSSA NWCVCKEGLG DAVWQKTLDY ACGAGADCNP IHSNGGCYNP 60 NTVKAHCNYA VNSYFQKKGQ AQGSCDFAGT ANPVTSDPSI TGCVYPSSAS TAGTTTTPVT 120 NTPGTPSTGT GTGTGTGTGT GTGTGTGTGT NTGTGTSTGT GTGTTTPTTS TTPTTGTTTP 180 TTTTPYTATP GVLGGIGTGV GPSGAGINSD DSGVIRLVDA SLFSSILTLF VSGLMLWWG* 240 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-20 | 22 | 91 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-33 | 22 | 105 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK93473.1 | 0 | 16 | 236 | 15 | 211 | unknown [Populus trichocarpa] |
RefSeq | NP_564059.1 | 0 | 1 | 137 | 1 | 149 | PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002284112.1 | 0 | 1 | 113 | 1 | 112 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002328640.1 | 0 | 1 | 110 | 1 | 108 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514663.1 | 0 | 1 | 239 | 1 | 215 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-19 | 17 | 107 | 8 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |