Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa015110m |
Family | CBM57 |
Protein Properties | Length: 1033 Molecular Weight: 116427 Isoelectric Point: 6.5696 |
Chromosome | Chromosome/Scaffold: 6 Start: 19458959 End: 19465515 |
Description | Di-glucose binding protein with Kinesin motor domain |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 74 | 217 | 1.1e-32 |
MFVNAGGDASNETDSSVKFLADTYFEGGNVLRTNEHINDGGDYPFIYQSARVGNFYYRFNCLPPGHYYVDIHFTEIINTNGPKGMRVFNVFIQEEKVLSD FDIFAVVGSNKPLQLVDSRVSVKEDGVVVIRFEGVNGSPVVSGI |
Full Sequence |
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Protein Sequence Length: 1033 Download |
MEDLQFDPVF QEAKTPISWV PDSDRVQQPN PDLKDSSLGE VDESLVESML CDSGSRLIPS 60 GLSRSNSTAD EYVMFVNAGG DASNETDSSV KFLADTYFEG GNVLRTNEHI NDGGDYPFIY 120 QSARVGNFYY RFNCLPPGHY YVDIHFTEII NTNGPKGMRV FNVFIQEEKV LSDFDIFAVV 180 GSNKPLQLVD SRVSVKEDGV VVIRFEGVNG SPVVSGIGIR RAPNVSVPKL VVEHFKCNNC 240 DAEIEVPSAQ MKLMQTKSTA KYEKKIQELT TQCQLKTKEC YEAWMSLTAA NEELDKVMMD 300 LDNVTFRTLS QDQTIQKQAE DIKNISSRYE CDKKYWTIAV NDLQEKIKLM HEEHLHLSRE 360 AHECADSIPE LNKMIFAVQA LVAECEDLKV KYNEEQAKRK KLFNEVQEAK GNIRVFCRCR 420 PLSKEEMAAG CKTVVDFEAA KDGCLGFLTG GSTKRSFKFD RVYTPKDDQV DVFVDASPMV 480 VSVLDGYNVC IFAYGQTGTG KTFTMEGTEQ NRGVNYRTLE QLFEIAKERS ETFSYSISVS 540 VLEVYNEQIR DLLAISPSSK RLEIKQASEG CHHVPGIVEA KVENIKEVWS VLQAGSNARA 600 IGSNNVNEHS SRSHCLLSIM VRSKNLINGE CTKSKLWLVD LAGSERLAKT DVQGERLKEA 660 QNINRSLSAL GDVISALANK SSHIPYRNSK LTHLLQDSLG GDSKTLMFVQ ISPSDQDLGE 720 TLSSLNFATR VRGIELGPAK KQVDTSELQK TKVMLEKARQ EARSKDESLR KLEESLQNLE 780 SKTKGKDQIY KNQQEKIKEL EGTLELKTAL HSQLEKQVSQ LSDRLRGKEE ICCSLQQKVK 840 DLENQLKDQM QESEFQSTIL QHKVKELEIK LKDQEQKSDS SALHQKIKEL QDKLREQEKQ 900 SEFADAVRAT PNEGKTCVRD EIMNDAEACI LRSSNSLNRP MSQGSISLRG NDSVRETRRK 960 REFKSGETEN IIRLPNSFND NKVRKSDPPK IARITRTAKP ATATQGPSVN RRFSRDQIQV 1020 KERDTVKKIW SR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd01369 | KISc_KHC_KIF5 | 4.0e-102 | 412 | 734 | 328 | + Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup. Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. | ||
cd00106 | KISc | 4.0e-123 | 412 | 732 | 329 | + Kinesin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. | ||
smart00129 | KISc | 2.0e-136 | 412 | 740 | 336 | + Kinesin motor, catalytic domain. ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division. | ||
pfam00225 | Kinesin | 4.0e-142 | 418 | 734 | 326 | + Kinesin motor domain. | ||
cd01366 | KISc_C_terminal | 3.0e-180 | 410 | 737 | 331 | + Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins. Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. |
Gene Ontology | |
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GO Term | Description |
GO:0003777 | microtubule motor activity |
GO:0005524 | ATP binding |
GO:0007018 | microtubule-based movement |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63715.1 | 0 | 1 | 895 | 1 | 884 | hypothetical protein [Vitis vinifera] |
EMBL | CAN63715.1 | 6e-22 | 904 | 1029 | 947 | 1076 | hypothetical protein [Vitis vinifera] |
EMBL | CBI40845.1 | 0 | 90 | 873 | 1 | 785 | unnamed protein product [Vitis vinifera] |
EMBL | CBI40845.1 | 9e-29 | 904 | 1032 | 847 | 979 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266404.1 | 0 | 1 | 1032 | 1 | 982 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2h58_A | 0 | 409 | 736 | 2 | 330 | A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp |
PDB | 3h4s_A | 0 | 399 | 788 | 1 | 383 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
PDB | 3cob_C | 0 | 407 | 774 | 1 | 368 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
PDB | 3cob_A | 0 | 407 | 774 | 1 | 368 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
PDB | 3cnz_B | 0 | 407 | 774 | 1 | 368 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EH194227 | 318 | 545 | 862 | 0 |
EL442930 | 266 | 498 | 761 | 0 |
FL921658 | 258 | 502 | 759 | 0 |
DV990845 | 302 | 466 | 763 | 0 |
ES865056 | 290 | 478 | 762 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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