Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa015239m |
Family | GH3 |
Protein Properties | Length: 614 Molecular Weight: 67209.4 Isoelectric Point: 9.3615 |
Chromosome | Chromosome/Scaffold: 6 Start: 12888859 End: 12891833 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 91 | 324 | 0 |
ASRLGIPMIYGIDAVHGHNNVYKATMFPHNVGLGATRDPELVKRIGAATALEVRATGIQYSFAPCVSVCRDPRWGRCYESFSEDPNIVKQMTDFVIGLQG EIPAGSPKGVPYVGGTDKVAGSAKHYVGDGGTTKGINENDTVIDWQGLLNIHMPGYPEAIAKGVATVMVSYSSWNGVKMHANHDLVTKYLKDTLKFKGIV ISDWLGVDKISNPPFTNYSNSVLLSIQAGLDMIM |
Full Sequence |
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Protein Sequence Length: 614 Download |
GTKIKVKAHH VKYKNPKEKI NVRVEDLLAR MTLKEKLGQM AQVDRGNITA KVMKEYNIGS 60 VLSGGESVPR TQATPRDWID MINKFQNWSL ASRLGIPMIY GIDAVHGHNN VYKATMFPHN 120 VGLGATRDPE LVKRIGAATA LEVRATGIQY SFAPCVSVCR DPRWGRCYES FSEDPNIVKQ 180 MTDFVIGLQG EIPAGSPKGV PYVGGTDKVA GSAKHYVGDG GTTKGINEND TVIDWQGLLN 240 IHMPGYPEAI AKGVATVMVS YSSWNGVKMH ANHDLVTKYL KDTLKFKGIV ISDWLGVDKI 300 SNPPFTNYSN SVLLSIQAGL DMIMLPYNYI DFVKFLTEHV NNKRIPMSRI DDAVRRILSV 360 KFMMGLFENP MSSYEYIPRL GCQEHRDLGR EAVRKSLVLL KNGKTPTAPL LPLPKKANRI 420 LVAGTHANNL GYQCGGWSLT WQGVSGNNHT VGTTILGAIA SAVNETTEIV FSLNPDTNFV 480 KANKFDYAVV AVGELPYAET KGDSVNLTIA EPGPSIITNV CGAVKCAVIV VSGRPVVIEP 540 YLSSMDALVA AWLPGTEGQG VADVLYGDYG FTGKLPRTWF RRVDQLPMNF GEKNYDPLLP 600 FGFGLTTQPV NKR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 4.0e-37 | 20 | 589 | 618 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-41 | 397 | 606 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-79 | 24 | 606 | 648 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-81 | 31 | 464 | 443 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 4.0e-93 | 32 | 360 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002266589.1 | 0 | 7 | 610 | 22 | 625 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266675.1 | 0 | 7 | 610 | 22 | 625 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002271545.1 | 0 | 13 | 613 | 27 | 627 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514453.1 | 0 | 6 | 608 | 19 | 621 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002523937.1 | 0 | 8 | 612 | 23 | 624 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 10 | 612 | 2 | 604 | A Chain A, Polygalacturonase From Aspergillus Aculeatus |
PDB | 1iex_A | 0 | 10 | 612 | 2 | 604 | A Chain A, Polygalacturonase From Aspergillus Aculeatus |
PDB | 1iew_A | 0 | 10 | 612 | 2 | 604 | A Chain A, Polygalacturonase From Aspergillus Aculeatus |
PDB | 1iev_A | 0 | 10 | 612 | 2 | 604 | A Chain A, Polygalacturonase From Aspergillus Aculeatus |
PDB | 1ieq_A | 0 | 10 | 612 | 2 | 604 | A Chain A, Polygalacturonase From Aspergillus Aculeatus |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 427 | 59 | 485 | 0 |
FN998758 | 328 | 56 | 383 | 0 |
FN998735 | 317 | 56 | 372 | 0 |
FN998511 | 317 | 56 | 372 | 0 |
HO784016 | 51 | 10 | 60 | 0.000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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