| Basic Information | |
|---|---|
| Species | Prunus persica |
| Cazyme ID | ppa016789m |
| Family | CBM43 |
| Protein Properties | Length: 453 Molecular Weight: 50094.5 Isoelectric Point: 5.4128 |
| Chromosome | Chromosome/Scaffold: 15 Start: 125049 End: 126846 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 361 | 446 | 9.4e-25 |
| WCVVAKGVNNDELDSALNNLCSSSSGNGTCDALSPGKECYEPVSEILHASYAFSSYWAKFWSHGATCYFDGLAEQTTVDPSHGSCK | |||
| GH17 | 7 | 334 | 0 |
| IGINYGQLGNNLPSPNSSVEFIKSMNAGRVKLYDANPEILNLLSGTNLQVSIMVPNNEISTIASNQAKADEWVRNNVLPYYPQTMIRYLLVGNEVLSYNS SDQDRQMWLDLVPAMTKFKSSLKAQNITNIKVGTPLAMDVLESTFPPSNSMFRPDISNSVMAPMLRFLNRTNSFMFIDVYPFFPWSSNSTNISLDFALFR GNNNTNYYTDSGSGLIYTNLLDQMLDSLIYAMAKLGYQNIRLLITETGWPNSGDIEQPGANIHNAATYNRNLIHRMVAKPPLGTPARPGVVIPTFIFSLF DENQKTGPGTERHWGLLHADGTPIYDID | |||
| Full Sequence |
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| Protein Sequence Length: 453 Download |
| AEISSKIGIN YGQLGNNLPS PNSSVEFIKS MNAGRVKLYD ANPEILNLLS GTNLQVSIMV 60 PNNEISTIAS NQAKADEWVR NNVLPYYPQT MIRYLLVGNE VLSYNSSDQD RQMWLDLVPA 120 MTKFKSSLKA QNITNIKVGT PLAMDVLEST FPPSNSMFRP DISNSVMAPM LRFLNRTNSF 180 MFIDVYPFFP WSSNSTNISL DFALFRGNNN TNYYTDSGSG LIYTNLLDQM LDSLIYAMAK 240 LGYQNIRLLI TETGWPNSGD IEQPGANIHN AATYNRNLIH RMVAKPPLGT PARPGVVIPT 300 FIFSLFDENQ KTGPGTERHW GLLHADGTPI YDIDLTGKRR LEDYKPLPEA NNNSPYKGMV 360 WCVVAKGVNN DELDSALNNL CSSSSGNGTC DALSPGKECY EPVSEILHAS YAFSSYWAKF 420 WSHGATCYFD GLAEQTTVDP SHGSCKFPSV TL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0002 | 245 | 326 | 85 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-8 | 361 | 433 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-23 | 361 | 447 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-112 | 7 | 334 | 329 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM64490.1 | 0 | 3 | 452 | 33 | 476 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| GenBank | ABK28569.1 | 0 | 3 | 452 | 33 | 476 | unknown [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 1 | 452 | 23 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189019.1 | 0 | 3 | 452 | 33 | 476 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002298669.1 | 0 | 6 | 452 | 22 | 462 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 7 | 335 | 3 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3ur8_A | 0 | 7 | 335 | 3 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3ur7_B | 0 | 7 | 335 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 7 | 335 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 7 | 335 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR944118 | 277 | 89 | 365 | 0 |
| GH271224 | 254 | 116 | 369 | 0 |
| EX050956 | 299 | 154 | 452 | 0 |
| DY302831 | 322 | 37 | 357 | 0 |
| DY968818 | 313 | 42 | 353 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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