Basic Information | |
---|---|
Species | Prunus persica |
Cazyme ID | ppa016857m |
Family | GT47 |
Protein Properties | Length: 510 Molecular Weight: 58834.7 Isoelectric Point: 7.495 |
Chromosome | Chromosome/Scaffold: 5 Start: 10678680 End: 10680419 |
Description | root hair specific 8 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 120 | 454 | 0 |
GGRGVYVYDLPSKFNKDLVGQCTDMVPWMDFCKYFKNEALGEPIPKLGNGWYQTHQYSLEPIFHQRVLKHPCRIYNENEAKLFYVPFYGGLDILRWHFKN VSNDVKDALSLELIAWLEKQKPWAKNSGKDHVVVLGKVSWDFRRKDGSWGTRLLEIDQMENPIKLLIERQPWQPNDIGIPHPTYFHPHSDDDIMAWQWKI ISSYRKRLVSFAGAARPGAAESIRSILIKQCNSSADNGNQCHFLDCSSGGCDQPESVIELFMESEFCLQPPGDSPTRKSLFDSLISGCIPVLFDPFTAYY QYPWHLPEDHEKYSVFVDQEEVRQVKVNVVEMLMK |
Full Sequence |
---|
Protein Sequence Length: 510 Download |
MASISMSKRK SKLTRKPDPK EVCNCVIVLF KFLHRIPAAF LILFLIYLWS SSTTIISGNI 60 VHICVSSRKL NDHYCLSAVL MRNGENKDRE EEIANAKKEV EEQLRLHRSW ISENKQAECG 120 GRGVYVYDLP SKFNKDLVGQ CTDMVPWMDF CKYFKNEALG EPIPKLGNGW YQTHQYSLEP 180 IFHQRVLKHP CRIYNENEAK LFYVPFYGGL DILRWHFKNV SNDVKDALSL ELIAWLEKQK 240 PWAKNSGKDH VVVLGKVSWD FRRKDGSWGT RLLEIDQMEN PIKLLIERQP WQPNDIGIPH 300 PTYFHPHSDD DIMAWQWKII SSYRKRLVSF AGAARPGAAE SIRSILIKQC NSSADNGNQC 360 HFLDCSSGGC DQPESVIELF MESEFCLQPP GDSPTRKSLF DSLISGCIPV LFDPFTAYYQ 420 YPWHLPEDHE KYSVFVDQEE VRQVKVNVVE MLMKISKKEK DDMRRYIVYE LLPGLVYGDS 480 TAKLEKFQDA FSIIMSSLME RVTKMDSTA* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-66 | 119 | 455 | 351 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34680.1 | 0 | 3 | 509 | 457 | 996 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002269913.1 | 0 | 3 | 509 | 2 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299537.1 | 0.0000002 | 3 | 85 | 2 | 84 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002299537.1 | 0 | 51 | 505 | 127 | 572 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509789.1 | 0 | 3 | 505 | 2 | 566 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |