y
Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa017141m |
Family | CE8 |
Protein Properties | Length: 346 Molecular Weight: 38034.1 Isoelectric Point: 9.2543 |
Chromosome | Chromosome/Scaffold: 1 Start: 8735697 End: 8737346 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 51 | 336 | 0 |
KVDINGKGDFKSVQAAIDSVPEGNSKWIIIHVRKGVYREKVIVPRSKPYIFMRGNGKGRSAIVWSQSSSDNVESATFSVEAPHFIAFGISFKNEAPTGVA YTSQNQSVAAFVAADKVAFYHCAFYSTHNTLFDYKGRHYYDNCYIQGSIDFIFGRGKSVYHGCEIFVIGDKRVSIKGSVTAQNRESEKENSGFVFNKGKL YGVGDTVYLGRAKGAFSRVVYAHMYLSKTVVPQGWTNWSYAGGTETLYHAEYKCKGPGAEAGGRAEWAKQLTEKEAAPFLSIDFIN |
Full Sequence |
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Protein Sequence Length: 346 Download |
MAGSTSTTFI TLAIIFSIAV TFTNVVDGLT AETVIDSPLL TQKINSNRTI KVDINGKGDF 60 KSVQAAIDSV PEGNSKWIII HVRKGVYREK VIVPRSKPYI FMRGNGKGRS AIVWSQSSSD 120 NVESATFSVE APHFIAFGIS FKNEAPTGVA YTSQNQSVAA FVAADKVAFY HCAFYSTHNT 180 LFDYKGRHYY DNCYIQGSID FIFGRGKSVY HGCEIFVIGD KRVSIKGSVT AQNRESEKEN 240 SGFVFNKGKL YGVGDTVYLG RAKGAFSRVV YAHMYLSKTV VPQGWTNWSY AGGTETLYHA 300 EYKCKGPGAE AGGRAEWAKQ LTEKEAAPFL SIDFINGQEW LPVWL* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02497 | PLN02497 | 6.0e-80 | 48 | 341 | 297 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 6.0e-87 | 50 | 341 | 292 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 9.0e-90 | 36 | 341 | 308 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 2.0e-96 | 43 | 342 | 310 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 0 | 9 | 345 | 337 | + Probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU23222.1 | 0 | 7 | 345 | 13 | 346 | unknown [Glycine max] |
RefSeq | NP_188331.1 | 0 | 32 | 345 | 28 | 340 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002272939.1 | 0 | 10 | 345 | 11 | 348 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311381.1 | 0 | 11 | 344 | 10 | 341 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523016.1 | 0 | 21 | 345 | 28 | 350 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.4013e-45 | 50 | 341 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-32 | 55 | 341 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.0000000000002 | 52 | 215 | 35 | 217 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.000000000005 | 60 | 343 | 18 | 340 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.000000000005 | 60 | 343 | 18 | 340 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |