| Basic Information | |
|---|---|
| Species | Prunus persica |
| Cazyme ID | ppa019537m |
| Family | AA7 |
| Protein Properties | Length: 227 Molecular Weight: 24864.5 Isoelectric Point: 8.7934 |
| Chromosome | Chromosome/Scaffold: 4 Start: 4988062 End: 4988742 |
| Description | FAD-binding Berberine family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA7 | 68 | 226 | 0 |
| LRFLNNSTPKPKVIVTPFHESHVQAAVICSKKHGIQKRFQSGGHDYEGLSYVSYAPFIIIVQTIHIDVKNESAWVESGATLGELYYLIAQKSNVHEFPAG SCPTMGVEGHISGGGFGTIFRKYGLAVDNVIDARIVDVNGRILSRKSMGEELLWAIRGG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 227 Download |
| MVFFDVKLLP LLIILFNSVW SPSSNSISES LLQCLSTHLK HSNSSKEIIL TRNSSAYSSI 60 LQSSIQNLRF LNNSTPKPKV IVTPFHESHV QAAVICSKKH GIQKRFQSGG HDYEGLSYVS 120 YAPFIIIVQT IHIDVKNESA WVESGATLGE LYYLIAQKSN VHEFPAGSCP TMGVEGHISG 180 GGFGTIFRKY GLAVDNVIDA RIVDVNGRIL SRKSMGEELL WAIRGG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0277 | GlcD | 1.0e-13 | 78 | 226 | 163 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| pfam01565 | FAD_binding_4 | 5.0e-21 | 78 | 210 | 138 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN80091.1 | 0 | 20 | 226 | 22 | 231 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299029.1 | 0 | 24 | 226 | 1 | 207 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002299035.1 | 0 | 11 | 224 | 9 | 231 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002317088.1 | 0 | 4 | 226 | 6 | 231 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523160.1 | 0 | 11 | 226 | 11 | 230 | Reticuline oxidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vte_A | 0 | 29 | 226 | 5 | 206 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 4dns_B | 0 | 22 | 226 | 4 | 209 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4dns_A | 0 | 22 | 226 | 4 | 209 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsj_B | 0 | 29 | 226 | 9 | 207 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsj_A | 0 | 29 | 226 | 9 | 207 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
