y
Basic Information | |
---|---|
Species | Prunus persica |
Cazyme ID | ppa019648m |
Family | GH5 |
Protein Properties | Length: 485 Molecular Weight: 53843.6 Isoelectric Point: 6.7381 |
Chromosome | Chromosome/Scaffold: 1 Start: 41203646 End: 41206393 |
Description | |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH5 | 196 | 471 | 9.69699e-43 |
MQEHWNTFIVEDDFHFIKTNGLNAVRIPVGWWIASDPTPPDPYVGGSLLALDKAFLWAQKYGLKVIIDLHAAPGSQNGFEHSASRDGSQEWGQTDENIQQ TVDVIDFLTARYARSPSLYAVELINEPFSPGASLQNVTKFYKAGYAAVRKHSSTAYVVFSNRLGPMEPRELFPLANGLKGSVIDVHYYSLFVSAFDNLTV QQNIDFIHTNRSQELNYVTTSNGPLTFVGEWVAEWKVTGATKEDYQRFANAQLEVWARATFGWAYWTLKNVNKHWS |
Full Sequence |
---|
Protein Sequence Length: 485 Download |
VPPNSGPVKA VNLGGWLVTE GWIKPSLFDG IPNKDFLDGT ELQFKSVTTG KYLAAELGGG 60 SIIVANRTSA SGWERFRLWR INETTFNFRV FNKDFVGLDV KGNGAQVVAV SKTPGSSETF 120 EIIRKPDDSS RVRIKAPNGF FLQAKTEDLV TADYAGSGSG WGNNDPSVFV ISFSGKLEGE 180 FQVTNGYGPK KAPQVMQEHW NTFIVEDDFH FIKTNGLNAV RIPVGWWIAS DPTPPDPYVG 240 GSLLALDKAF LWAQKYGLKV IIDLHAAPGS QNGFEHSASR DGSQEWGQTD ENIQQTVDVI 300 DFLTARYARS PSLYAVELIN EPFSPGASLQ NVTKFYKAGY AAVRKHSSTA YVVFSNRLGP 360 MEPRELFPLA NGLKGSVIDV HYYSLFVSAF DNLTVQQNID FIHTNRSQEL NYVTTSNGPL 420 TFVGEWVAEW KVTGATKEDY QRFANAQLEV WARATFGWAY WTLKNVNKHW SLEWMIKNGY 480 IKLT* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00257 | Fascin | 2.0e-5 | 44 | 153 | 110 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
pfam00150 | Cellulase | 4.0e-11 | 199 | 465 | 279 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 5.0e-31 | 172 | 480 | 346 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18831.1 | 0 | 7 | 483 | 34 | 505 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33033.1 | 0 | 7 | 483 | 34 | 505 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001064458.1 | 0 | 5 | 483 | 35 | 508 | Os10g0370500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002285806.1 | 0 | 8 | 483 | 34 | 508 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002513884.1 | 0 | 8 | 483 | 32 | 506 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1eqp_A | 3e-35 | 174 | 479 | 39 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1eqc_A | 4e-35 | 174 | 479 | 39 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1cz1_A | 4e-35 | 174 | 479 | 39 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DC898905 | 384 | 102 | 485 | 0 |
JG564701 | 300 | 167 | 466 | 0 |
EL450599 | 311 | 9 | 319 | 0 |
DC899299 | 321 | 165 | 485 | 0 |
EE076947 | 277 | 38 | 314 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|