Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa019696m |
Family | CE8 |
Protein Properties | Length: 369 Molecular Weight: 40381.9 Isoelectric Point: 9.0568 |
Chromosome | Chromosome/Scaffold: 7 Start: 3333665 End: 3336470 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 73 | 356 | 0 |
VKVMKDRSGEFKTITGAVNSIPVDNTKRVIVYIGGGEYNEKITIPRNKSFVTFYGSPTNIPTLTFAGTAQKYGTVDSATVIAESDYFVAANLIIKNSSPK PDGKRVGEQALALRVSGNKSALFNCRLIGFQDTLCDDKGNHFFQDCFIEGTVDFIFGSGKSLYLLHVLGNNEMTVIIAQARNSASEDTGYSFVHCNITGT GNGTYLGRAWRTSPRVVFAYTSMSEVITPADWNNKNRPKRDRTVFYGEYKCSGPASSMVGRVKYTKQLNEEQIKPFLSLSYIQG |
Full Sequence |
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Protein Sequence Length: 369 Download |
MARKNTCLGV HAALTVTLIL LTTIIAGADD ETLVVTDHPQ VNTWFNNNVN PYKERQGTLD 60 PALVTAEVGQ TVVKVMKDRS GEFKTITGAV NSIPVDNTKR VIVYIGGGEY NEKITIPRNK 120 SFVTFYGSPT NIPTLTFAGT AQKYGTVDSA TVIAESDYFV AANLIIKNSS PKPDGKRVGE 180 QALALRVSGN KSALFNCRLI GFQDTLCDDK GNHFFQDCFI EGTVDFIFGS GKSLYLLHVL 240 GNNEMTVIIA QARNSASEDT GYSFVHCNIT GTGNGTYLGR AWRTSPRVVF AYTSMSEVIT 300 PADWNNKNRP KRDRTVFYGE YKCSGPASSM VGRVKYTKQL NEEQIKPFLS LSYIQGSKWL 360 LPPPNPKA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 4.0e-80 | 70 | 360 | 294 | + putative pectinesterase | ||
PLN02671 | PLN02671 | 3.0e-80 | 69 | 360 | 303 | + pectinesterase | ||
PLN02304 | PLN02304 | 4.0e-88 | 78 | 362 | 298 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 5.0e-106 | 72 | 362 | 302 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 29 | 365 | 340 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38547.1 | 0 | 10 | 364 | 6 | 363 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309337.1 | 0 | 16 | 365 | 15 | 368 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 10 | 365 | 7 | 364 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321778.1 | 0 | 18 | 365 | 14 | 362 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333446.1 | 0 | 6 | 365 | 3 | 365 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2e-38 | 65 | 360 | 2 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4e-36 | 75 | 360 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-18 | 83 | 235 | 18 | 185 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-18 | 83 | 235 | 18 | 185 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-18 | 83 | 235 | 18 | 185 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |