Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa019857m |
Family | CE8 |
Protein Properties | Length: 154 Molecular Weight: 17314.5 Isoelectric Point: 8.098 |
Chromosome | Chromosome/Scaffold: 2 Start: 10268239 End: 10268700 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 6 | 140 | 0 |
GWQAVAFRISGDKAYFSGCGFYRAQDTLCDDVGRHYFKDCYIEGSIDFIFGNGRSMYKDCELYSIATKFGSIAAHYRNSADDKSGFAFMNCRVTGMGPLY VGRAMGKYSRIVYSYTYFDDVVTHGAWDDWGNTTA |
Full Sequence |
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Protein Sequence Length: 154 Download |
MPGMQGWQAV AFRISGDKAY FSGCGFYRAQ DTLCDDVGRH YFKDCYIEGS IDFIFGNGRS 60 MYKDCELYSI ATKFGSIAAH YRNSADDKSG FAFMNCRVTG MGPLYVGRAM GKYSRIVYSY 120 TYFDDVVTHG AWDDWGNTTA STTTKTPLLC SLRR |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 1.0e-51 | 2 | 135 | 136 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 2.0e-54 | 2 | 135 | 142 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 1.0e-55 | 2 | 135 | 134 | + pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-64 | 2 | 137 | 136 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 1.0e-91 | 1 | 135 | 135 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD65006.1 | 0 | 1 | 144 | 151 | 294 | pectinesterase family protein [Brassica oleracea] |
EMBL | CBI31927.1 | 0 | 1 | 144 | 156 | 299 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266321.1 | 0 | 1 | 144 | 163 | 306 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303355.1 | 0 | 1 | 146 | 124 | 267 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528921.1 | 0 | 1 | 144 | 83 | 226 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 3e-16 | 8 | 135 | 109 | 248 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 5e-16 | 8 | 135 | 113 | 252 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 0.000000000004 | 4 | 98 | 125 | 227 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 0.000000000004 | 4 | 98 | 125 | 227 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 0.000000000004 | 4 | 98 | 125 | 227 | A Chain A, Pectin Methylesterase From Carrot |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FG445958 | 135 | 1 | 135 | 0 |
BM269928 | 135 | 1 | 135 | 0 |
CV255572 | 135 | 1 | 135 | 0 |
FQ422665 | 135 | 1 | 135 | 0 |
FC912864 | 135 | 1 | 135 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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