| Basic Information | |
|---|---|
| Species | Prunus persica |
| Cazyme ID | ppa019999m |
| Family | CE8 |
| Protein Properties | Length: 291 Molecular Weight: 32495.8 Isoelectric Point: 6.6704 |
| Chromosome | Chromosome/Scaffold: 6 Start: 20437994 End: 20442517 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 11 | 276 | 0 |
| IIVDKNGQGKFTTVQQAIDSIPENNSLWTRILIKHGVYTEKVVIPKEKPYIILEGEANQLTSIEFGEGGNVVESPTFKLFADNFVARNIIFKAPAASLTG DKASFYHCKFISVQDTLHDGLGRHYFNDCFVEGAIDFIWGNGQSIYEKCKIISVTDRIGRAGFITAQGRSAANEPTGYVFNDCHVNGTGPIFLGRPYRNY SRVVFASTYMENIITPEGWSEWLTGPLNLTTFSEVNCKGPGADMSRRVSWEKKLSTEEVAYFTTTA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 291 Download |
| MYTYNALSRT IIVDKNGQGK FTTVQQAIDS IPENNSLWTR ILIKHGVYTE KVVIPKEKPY 60 IILEGEANQL TSIEFGEGGN VVESPTFKLF ADNFVARNII FKAPAASLTG DKASFYHCKF 120 ISVQDTLHDG LGRHYFNDCF VEGAIDFIWG NGQSIYEKCK IISVTDRIGR AGFITAQGRS 180 AANEPTGYVF NDCHVNGTGP IFLGRPYRNY SRVVFASTYM ENIITPEGWS EWLTGPLNLT 240 TFSEVNCKGP GADMSRRVSW EKKLSTEEVA YFTTTASFID KEGWLEKQPK * 300 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02480 | PLN02480 | 2.0e-85 | 9 | 285 | 294 | + Probable pectinesterase |
| PLN02304 | PLN02304 | 2.0e-86 | 10 | 286 | 301 | + probable pectinesterase |
| PLN02432 | PLN02432 | 8.0e-93 | 11 | 285 | 285 | + putative pectinesterase |
| PLN02682 | PLN02682 | 2.0e-93 | 8 | 285 | 304 | + pectinesterase family protein |
| PLN02497 | PLN02497 | 4.0e-112 | 8 | 289 | 301 | + probable pectinesterase |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40838.1 | 0 | 9 | 289 | 43 | 341 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002263748.1 | 0 | 10 | 289 | 31 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323773.1 | 0 | 11 | 289 | 1 | 288 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512520.1 | 0 | 7 | 269 | 29 | 311 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002518106.1 | 0 | 10 | 289 | 47 | 335 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 2.94273e-44 | 11 | 286 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 4e-37 | 12 | 286 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 3e-17 | 3 | 280 | 25 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.0000000000002 | 3 | 273 | 3 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.0000000000002 | 3 | 273 | 3 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX687561 | 237 | 5 | 222 | 0 |
| DV984237 | 289 | 21 | 287 | 0 |
| AM722128 | 254 | 8 | 252 | 0 |
| AM721699 | 252 | 8 | 250 | 0 |
| EX315894 | 275 | 35 | 287 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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