Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa020130m |
Family | CE8 |
Protein Properties | Length: 351 Molecular Weight: 38417.6 Isoelectric Point: 6.9003 |
Chromosome | Chromosome/Scaffold: 62 Start: 506 End: 2109 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 75 | 338 | 0 |
KVMKDGSGEFKTITDAVNSIPTNNTKHVIVYIGGGEYNEKITIPRNKPFITFYGSPTNMPTLTFAGTAQKYGTVDSATVIVESDYFVAANFIIKALALRV LGNKSALFNCRLIGFQDTLCDDKGNYFFKDCFIEGTVDFIFGSGKSLYLNTELHVLGNNEMTVITTQARDSASEDTGYSFLYCNITGTGNGTYLGRAWRT SPRVVFAYTSMSEVITSAGWNDKNRPEQYKCSGPGSSMVGRVKYTKQLNEEQIKPFLSLSYIQG |
Full Sequence |
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Protein Sequence Length: 351 Download |
MAGKNTCFGV HAALTMTLLI LPTAIIAVAD DDTPVPADHS QVNTWFNNNV NPYKERQGTL 60 DPTLVTDEVG QTVIKVMKDG SGEFKTITDA VNSIPTNNTK HVIVYIGGGE YNEKITIPRN 120 KPFITFYGSP TNMPTLTFAG TAQKYGTVDS ATVIVESDYF VAANFIIKAL ALRVLGNKSA 180 LFNCRLIGFQ DTLCDDKGNY FFKDCFIEGT VDFIFGSGKS LYLNTELHVL GNNEMTVITT 240 QARDSASEDT GYSFLYCNIT GTGNGTYLGR AWRTSPRVVF AYTSMSEVIT SAGWNDKNRP 300 EQYKCSGPGS SMVGRVKYTK QLNEEQIKPF LSLSYIQGSK WLLPPPNPKA * 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 1.0e-70 | 70 | 342 | 303 | + pectinesterase | ||
PLN02304 | PLN02304 | 5.0e-75 | 62 | 344 | 313 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 2.0e-78 | 71 | 342 | 288 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-91 | 73 | 344 | 302 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 10 | 347 | 360 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002309337.1 | 0 | 8 | 347 | 9 | 368 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 10 | 347 | 7 | 364 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321778.1 | 0 | 12 | 347 | 10 | 362 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333446.1 | 0 | 6 | 347 | 3 | 365 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511045.1 | 0 | 1 | 347 | 1 | 366 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 4e-34 | 69 | 342 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-30 | 76 | 342 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 4e-17 | 73 | 227 | 8 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 4e-17 | 73 | 227 | 8 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-17 | 73 | 227 | 8 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |