| Basic Information | |
|---|---|
| Species | Prunus persica |
| Cazyme ID | ppa020246m |
| Family | GH28 |
| Protein Properties | Length: 185 Molecular Weight: 19843.2 Isoelectric Point: 7.2339 |
| Chromosome | Chromosome/Scaffold: 3 Start: 3365852 End: 3368731 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH28 | 37 | 163 | 5e-22 |
| SVGGLGVNGAYETTEEIHVRNCTFNGGSGYAKKISFEQIKLVASRNLIVIDQHYCNGRHDCKNSISGVGVSDVKYIDFQATSASEEAIKFDCSKILGCVN IVMNQINIALQVAGKEIHASCNNVNGT | |||
| Full Sequence |
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| Protein Sequence Length: 185 Download |
| MAYIRSINQT TFNVLDYGAV GDGQTDDSKN SHNPVPSVGG LGVNGAYETT EEIHVRNCTF 60 NGGSGYAKKI SFEQIKLVAS RNLIVIDQHY CNGRHDCKNS ISGVGVSDVK YIDFQATSAS 120 EEAIKFDCSK ILGCVNIVMN QINIALQVAG KEIHASCNNV NGTSNRKHPR PHPHPHCLDG 180 NVAA* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02218 | PLN02218 | 2.0e-18 | 21 | 161 | 141 | + polygalacturonase ADPG | ||
| PLN02793 | PLN02793 | 2.0e-19 | 37 | 164 | 140 | + Probable polygalacturonase | ||
| PLN03010 | PLN03010 | 2.0e-26 | 37 | 165 | 141 | + polygalacturonase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004650 | polygalacturonase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002324855.1 | 7e-39 | 37 | 169 | 246 | 389 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515526.1 | 3e-37 | 37 | 181 | 243 | 395 | Polygalacturonase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002515527.1 | 7e-32 | 45 | 169 | 213 | 347 | polygalacturonase, putative [Ricinus communis] |
| RefSeq | XP_002530440.1 | 1e-33 | 37 | 169 | 58 | 201 | polygalacturonase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CV536895 | 138 | 37 | 162 | 3e-29 |
| CV537970 | 138 | 37 | 162 | 1e-28 |
| GO013888 | 140 | 37 | 163 | 2e-27 |
| GE483974 | 140 | 37 | 164 | 3e-27 |
| DR037951 | 138 | 37 | 162 | 8e-25 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Glycine max | Glyma09g36750.2.98.202 | Glyma09g36750.2.98.202 | |||
| Malus domestica | MDP0000207322 | MDP0000773314 | |||
| Prunus persica | ppa023418m | ppa021254m.200.301 | ppa021254m.200.301 | ||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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