Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa023784m |
Family | CE8 |
Protein Properties | Length: 424 Molecular Weight: 46634.3 Isoelectric Point: 9.2055 |
Chromosome | Chromosome/Scaffold: 7 Start: 15028865 End: 15030661 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 107 | 395 | 0 |
TVGLKGCTNFSSVQKAVDAAPELSNYRTLIIIDSGTYREKVTVAANKTNLIFQGQGYLNTIIAWNDTANSTGGTARSSSVAIFAPYFTAYNISFQNTAPP PGPGRIGAQAVALRIAGDQAAFYGCGFYGAQDTLNDDRGRHYFSECFIQGSIDFIFGKAKSLYEGCTINSIANAVKRGISGAVTAQGRQSAQEQSGFSFV NCSIGGSGKVWLGRAWGAYATVVFSKTYMSDVVASDGWNDWRDPSRDQTVLFGEYDCMGSGSNYTHRTSYARQLNESEVAPFLDISYVD |
Full Sequence |
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Protein Sequence Length: 424 Download |
MRTKTTLFFW FSAFVIALVS TIISLHHIPS SLSSTSTIAK SAQNSFKLAI LDGVFKKSGE 60 SLLSTLRSIV SRHHHHHHHR RRRSPKCANT KWKFRLVSEY NVSLVLTVGL KGCTNFSSVQ 120 KAVDAAPELS NYRTLIIIDS GTYREKVTVA ANKTNLIFQG QGYLNTIIAW NDTANSTGGT 180 ARSSSVAIFA PYFTAYNISF QNTAPPPGPG RIGAQAVALR IAGDQAAFYG CGFYGAQDTL 240 NDDRGRHYFS ECFIQGSIDF IFGKAKSLYE GCTINSIANA VKRGISGAVT AQGRQSAQEQ 300 SGFSFVNCSI GGSGKVWLGR AWGAYATVVF SKTYMSDVVA SDGWNDWRDP SRDQTVLFGE 360 YDCMGSGSNY THRTSYARQL NESEVAPFLD ISYVDGNEWL LHPPPFNLHD DHYKHNDQLT 420 QTF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 1.0e-94 | 99 | 400 | 312 | + pectinesterase | ||
PLN02634 | PLN02634 | 3.0e-104 | 104 | 400 | 304 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 6.0e-108 | 105 | 406 | 303 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 2.0e-125 | 102 | 402 | 308 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 1.0e-149 | 101 | 400 | 303 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI30191.1 | 0 | 33 | 414 | 30 | 413 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181209.1 | 0 | 86 | 409 | 72 | 394 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264941.1 | 0 | 105 | 414 | 14 | 323 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326223.1 | 0 | 95 | 419 | 8 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519425.1 | 0 | 33 | 400 | 30 | 367 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2.99878e-43 | 106 | 408 | 9 | 317 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-37 | 108 | 400 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 1e-17 | 116 | 340 | 44 | 285 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.00000000000002 | 116 | 388 | 18 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.00000000000002 | 116 | 388 | 18 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |