| Basic Information | |
|---|---|
| Species | Prunus persica |
| Cazyme ID | ppa024066m |
| Family | CE8 |
| Protein Properties | Length: 331 Molecular Weight: 36354.4 Isoelectric Point: 9.0304 |
| Chromosome | Chromosome/Scaffold: 2 Start: 23799264 End: 23800847 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 66 | 318 | 0 |
| IKVNKDGRGQFKTIADAVNSNPVGNTKRVIVYIGGVYNEKITIPQNKPFVTFYGSPTTMSTLTFAGTAQKYGTVDSTTVIAESDYFVAAITLLLRYNSSP RPDGKRVGEQALALRVSSNKSALFNCRLIGFQDTLCDDRGNHFFKDCFIEGTLHVLGNNEMTVITAQARDSTSEDTGDSFVHCNITEIGNGTYLGKVWRT SPRVVFAYTSITVFYGEYKCSSPGSSMVERVKYAKQLTGEQIKPFLSLDYIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 331 Download |
| LIFTILITTL LILLTATIAM ANYNTQLPAD HSQVNTWFNN NVKPYTARNG TLDSTLAMAE 60 ASQKVIKVNK DGRGQFKTIA DAVNSNPVGN TKRVIVYIGG VYNEKITIPQ NKPFVTFYGS 120 PTTMSTLTFA GTAQKYGTVD STTVIAESDY FVAAITLLLR YNSSPRPDGK RVGEQALALR 180 VSSNKSALFN CRLIGFQDTL CDDRGNHFFK DCFIEGTLHV LGNNEMTVIT AQARDSTSED 240 TGDSFVHCNI TEIGNGTYLG KVWRTSPRVV FAYTSITVFY GEYKCSSPGS SMVERVKYAK 300 QLTGEQIKPF LSLDYIQGSK WLLPPPNPKV * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02773 | PLN02773 | 1.0e-54 | 64 | 330 | 320 | + pectinesterase |
| PLN02304 | PLN02304 | 2.0e-56 | 68 | 324 | 302 | + probable pectinesterase |
| PLN02432 | PLN02432 | 3.0e-60 | 65 | 322 | 295 | + putative pectinesterase |
| PLN02682 | PLN02682 | 9.0e-75 | 65 | 324 | 306 | + pectinesterase family protein |
| PLN02665 | PLN02665 | 3.0e-175 | 21 | 327 | 344 | + pectinesterase family protein |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI38547.1 | 0 | 10 | 326 | 12 | 363 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002309337.1 | 0 | 1 | 327 | 7 | 368 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002318197.1 | 0 | 2 | 327 | 4 | 364 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321778.1 | 0 | 10 | 327 | 13 | 362 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002333446.1 | 0 | 2 | 327 | 5 | 365 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 2e-23 | 66 | 322 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 7e-22 | 68 | 322 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 0.00000000000009 | 65 | 221 | 8 | 177 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.00000000000009 | 65 | 221 | 8 | 177 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.00000000000009 | 65 | 221 | 8 | 177 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
