Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa024139m |
Family | CE8 |
Protein Properties | Length: 336 Molecular Weight: 36751.1 Isoelectric Point: 8.2634 |
Chromosome | Chromosome/Scaffold: 5 Start: 8359383 End: 8362110 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 31 | 325 | 0 |
IAVDINGSGDFLSVQAAVNAVPANNTVNVLILISPGYYREKVVVPATKPYITFQGAGKDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNIS FKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDVGRHYFKDCYIEGSIDFIFGNGRSMYKDCELHSIATKFGSIAAHYRNSADDKSGFA FVNCRVTGTGPLYVGRAMGKYSRIVYSYTYFDDVVAHGAWDDWGNTTASTTTKRSVFMGVYKCWGPGEEALRGVSCAPELDYELAHPFLVKSFVN |
Full Sequence |
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Protein Sequence Length: 336 Download |
MLVHTTNNNG STSNSTKNHH KWVGPTGHRQ IAVDINGSGD FLSVQAAVNA VPANNTVNVL 60 ILISPGYYRE KVVVPATKPY ITFQGAGKDV TVIEWHDRAS DPGPNGQQLR TYRTASVTVF 120 ANYFSARNIS FKNTAPAPMP GMQGWQAVAF RISGDKAYFS GCGFYGAQDT LCDDVGRHYF 180 KDCYIEGSID FIFGNGRSMY KDCELHSIAT KFGSIAAHYR NSADDKSGFA FVNCRVTGTG 240 PLYVGRAMGK YSRIVYSYTY FDDVVAHGAW DDWGNTTAST TTKRSVFMGV YKCWGPGEEA 300 LRGVSCAPEL DYELAHPFLV KSFVNGRHWI APSDA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 7.0e-90 | 29 | 332 | 306 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 4.0e-100 | 31 | 335 | 313 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 1.0e-105 | 27 | 330 | 306 | + pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-124 | 29 | 332 | 305 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 0 | 21 | 335 | 315 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD64977.1 | 0 | 11 | 335 | 39 | 360 | pectinesterase family protein [Brassica oleracea] |
GenBank | ABD65006.1 | 0 | 9 | 335 | 17 | 344 | pectinesterase family protein [Brassica oleracea] |
EMBL | CBI31927.1 | 0 | 12 | 335 | 29 | 349 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266321.1 | 0 | 12 | 335 | 36 | 356 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303355.1 | 0 | 16 | 332 | 1 | 314 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 3e-34 | 23 | 330 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4e-26 | 36 | 330 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 7e-20 | 40 | 237 | 43 | 253 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 1e-18 | 41 | 236 | 18 | 227 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 1e-18 | 41 | 236 | 18 | 227 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY273837 | 314 | 22 | 335 | 0 |
EX098970 | 277 | 60 | 336 | 0 |
EG517791 | 276 | 61 | 336 | 0 |
FC912864 | 289 | 22 | 310 | 0 |
FQ422665 | 260 | 60 | 319 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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