Basic Information | |
---|---|
Species | Prunus persica |
Cazyme ID | ppa024321m |
Family | GT47 |
Protein Properties | Length: 411 Molecular Weight: 48040.2 Isoelectric Point: 9.7259 |
Chromosome | Chromosome/Scaffold: 1 Start: 42551895 End: 42553127 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 17 | 355 | 0 |
GRYIYVYNLPKRFNHDLLKNCHSLQRWTDMCPYISNMGLGPRIKNSKKQLVGNGWFATNQFLLEVIFHNRMKQYKCLTNDSSLASAVFVPFYPGLDVGRY LWDYNISVRDASPLEFVKWLSHRPEWKKMWGRDHFLVGGRIAWDFRRQTDKDSAWGSKLMFLPEAKNMTLLSIESSCWNNEQAIPYPTYFHPSKDSEVFE WQRRMRKRKRRHLFSFAGAPRPDSKDSIRDMIINQCQSSTSCKLVGCHRGANKCDDPLNVMKVFEASVFCLQPSGDSYTRRSTFDSILAGCIPVFFHPGS AYVQYLWHFPNTPSKYSVFISEKDIRDQKVMINETLHRI |
Full Sequence |
---|
Protein Sequence Length: 411 Download |
MSSEIGKKNS DSDLCLGRYI YVYNLPKRFN HDLLKNCHSL QRWTDMCPYI SNMGLGPRIK 60 NSKKQLVGNG WFATNQFLLE VIFHNRMKQY KCLTNDSSLA SAVFVPFYPG LDVGRYLWDY 120 NISVRDASPL EFVKWLSHRP EWKKMWGRDH FLVGGRIAWD FRRQTDKDSA WGSKLMFLPE 180 AKNMTLLSIE SSCWNNEQAI PYPTYFHPSK DSEVFEWQRR MRKRKRRHLF SFAGAPRPDS 240 KDSIRDMIIN QCQSSTSCKL VGCHRGANKC DDPLNVMKVF EASVFCLQPS GDSYTRRSTF 300 DSILAGCIPV FFHPGSAYVQ YLWHFPNTPS KYSVFISEKD IRDQKVMINE TLHRIPKRQV 360 SAMREEVIRL IPRVIYADPR APRLETVEDA FDIAVKGVLD RVERIRREMK E 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-60 | 14 | 341 | 343 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN64889.1 | 0 | 11 | 411 | 296 | 696 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280815.1 | 0 | 11 | 411 | 89 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313430.1 | 0 | 7 | 410 | 130 | 536 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
RefSeq | XP_002518606.1 | 0 | 10 | 411 | 71 | 469 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 8 | 411 | 95 | 503 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EL456596 | 259 | 69 | 326 | 0 |
DV145943 | 262 | 66 | 323 | 0 |
JG636298 | 264 | 86 | 348 | 0 |
JK793974 | 237 | 90 | 325 | 0 |
EY661612 | 258 | 149 | 405 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|