Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa026195m |
Family | CE8 |
Protein Properties | Length: 333 Molecular Weight: 36718.6 Isoelectric Point: 9.336 |
Chromosome | Chromosome/Scaffold: 62 Start: 8744 End: 10243 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 37 | 319 | 0 |
VKVMKDRSGEFKTITGAVNSIPVDNTKRVIVYIGGGEYNEKITIPRNKSFVTFYGSPTNIPTLTFAGTAQKYGTVDSATVIAESDYFVAANLIIKNSSPK PDGKRVGEQALALRVSGNKSALFNCRLIGFQDTLCDDKGNHFFQDCFIEGTVDFIFGSGKSLYLLHVLGNNEMTVIIAQARNSASEDTGYSFVHCNITGT GNGTYLGRAWRTSPRVVFAYTSMSEVITPADWNNKNRPKRDRTVFYGEYKCSGPASSMVGRVKYTKQLNEEQIKPFLSLSYIQ |
Full Sequence |
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Protein Sequence Length: 333 Download |
DHPQVNTWFN NNVNPYKERQ GTLDPALVTA EVGQTVVKVM KDRSGEFKTI TGAVNSIPVD 60 NTKRVIVYIG GGEYNEKITI PRNKSFVTFY GSPTNIPTLT FAGTAQKYGT VDSATVIAES 120 DYFVAANLII KNSSPKPDGK RVGEQALALR VSGNKSALFN CRLIGFQDTL CDDKGNHFFQ 180 DCFIEGTVDF IFGSGKSLYL LHVLGNNEMT VIIAQARNSA SEDTGYSFVH CNITGTGNGT 240 YLGRAWRTSP RVVFAYTSMS EVITPADWNN KNRPKRDRTV FYGEYKCSGP ASSMVGRVKY 300 TKQLNEEQIK PFLSLSYIQS SKWLLPPPNP KV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 4.0e-79 | 34 | 324 | 294 | + putative pectinesterase | ||
PLN02671 | PLN02671 | 1.0e-79 | 33 | 324 | 303 | + pectinesterase | ||
PLN02304 | PLN02304 | 2.0e-87 | 42 | 326 | 298 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 5.0e-105 | 36 | 326 | 302 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 1 | 329 | 332 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38547.1 | 0 | 1 | 328 | 33 | 363 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277202.1 | 0 | 1 | 328 | 34 | 364 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309337.1 | 0 | 1 | 329 | 36 | 368 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 1 | 329 | 32 | 364 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321778.1 | 0 | 5 | 329 | 37 | 362 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 5e-38 | 29 | 324 | 2 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-35 | 39 | 324 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-18 | 47 | 199 | 18 | 185 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-18 | 47 | 199 | 18 | 185 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-18 | 47 | 199 | 18 | 185 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY300112 | 293 | 1 | 290 | 0 |
DY292191 | 311 | 1 | 305 | 0 |
DY300051 | 295 | 1 | 292 | 0 |
DY275544 | 293 | 1 | 290 | 0 |
DY263772 | 301 | 1 | 298 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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