| Basic Information | |
|---|---|
| Species | Prunus persica |
| Cazyme ID | ppb004066m |
| Family | CBM43 |
| Protein Properties | Length: 484 Molecular Weight: 52582.5 Isoelectric Point: 6.8738 |
| Chromosome | Chromosome/Scaffold: 6 Start: 1636903 End: 1639493 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 366 | 445 | 3.3e-24 |
| WCVVNNNKDLSNATASSLEACSLADCTALSPGGSCSNISWPGNISYAFNSYYQQHNQSADSCNFGGLGLITTVDPSVDNC | |||
| GH17 | 23 | 346 | 0 |
| VGVNWGTTASHPLPPTKVVELLKSNNVTKVKLLDADPGVLEALSGSNLGVTVGIPNASLRTLNSSKKAAESWVHDNVTRYVSNGGSGVKIEYVAVGDEPF LQSYGEQFHPFVIGAAMNIHIALARAKLESKVKVVVPCSFDSFLSESGHPSKGHFRADLNRTMIELLTFLSKHSSPFFATISPFLSLHQNKNISLDFTLF KANAKPHNDSRRTYKNSFDLSYDILVTALSTVGFPKMEIVVSQIGWPTDGAANATSSTAETFMKGLVEHLHSKSGTPLRPRDPPSETYIFSLLDEDQRSV STGNFERHWGVFTFDGQAKYHFDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 484 Download |
| MPPNLCTVVV FLLATMAYGG GAVGVNWGTT ASHPLPPTKV VELLKSNNVT KVKLLDADPG 60 VLEALSGSNL GVTVGIPNAS LRTLNSSKKA AESWVHDNVT RYVSNGGSGV KIEYVAVGDE 120 PFLQSYGEQF HPFVIGAAMN IHIALARAKL ESKVKVVVPC SFDSFLSESG HPSKGHFRAD 180 LNRTMIELLT FLSKHSSPFF ATISPFLSLH QNKNISLDFT LFKANAKPHN DSRRTYKNSF 240 DLSYDILVTA LSTVGFPKME IVVSQIGWPT DGAANATSST AETFMKGLVE HLHSKSGTPL 300 RPRDPPSETY IFSLLDEDQR SVSTGNFERH WGVFTFDGQA KYHFDFIQGS KNLVDAQNVE 360 YLPSKWCVVN NNKDLSNATA SSLEACSLAD CTALSPGGSC SNISWPGNIS YAFNSYYQQH 420 NQSADSCNFG GLGLITTVDP SVDNCRFSVQ LRTSLSDFLY PAYLTQWMTL LVTAILLSLT 480 IFT* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03459 | 3,4-PCD | 0.008 | 284 | 347 | 67 | + Protocatechuate 3,4-dioxygenase (3,4-PCD) catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate. 3,4-PCDs are large aggregates of 12 protomers, each composed of an alpha- and beta-subunit and an Fe3+ ion bound in the beta-subunit at the alpha-beta-subunit interface. 3,4-PCD is a member of the aromatic dioxygenases which are non-heme iron intradiol-cleaving enzymes that break the C1-C2 bond and utilize Fe3+. | ||
| COG5309 | COG5309 | 0.002 | 258 | 337 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 4.0e-16 | 365 | 433 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-31 | 365 | 447 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-71 | 23 | 346 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95444.1 | 0 | 23 | 461 | 35 | 470 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| EMBL | CBI28434.1 | 0 | 1 | 479 | 1 | 481 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_200656.2 | 0 | 22 | 467 | 25 | 464 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002269108.1 | 0 | 22 | 476 | 25 | 481 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313970.1 | 0 | 22 | 477 | 21 | 476 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 23 | 346 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 3f55_C | 0 | 23 | 346 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 3f55_B | 0 | 23 | 346 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 3f55_A | 0 | 23 | 346 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 3em5_D | 0 | 23 | 346 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
