| Basic Information | |
|---|---|
| Species | Prunus persica |
| Cazyme ID | ppb012738m |
| Family | CE8 |
| Protein Properties | Length: 127 Molecular Weight: 14077 Isoelectric Point: 9.05 |
| Chromosome | Chromosome/Scaffold: 7 Start: 9268713 End: 9269258 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 13 | 116 | 1.3e-26 |
| RNTKRVVVYVGGGAYNEKIKIPQNKPFVTLYGLPKNMPTLMSHGTAQKYGTVYSEFGTGAGWDAQAVALQISGDKAAFYNCKFIGFQDTLYDYKGLHFFK DCYI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 127 Download |
| METSNPHGCI QERNTKRVVV YVGGGAYNEK IKIPQNKPFV TLYGLPKNMP TLMSHGTAQK 60 YGTVYSEFGT GAGWDAQAVA LQISGDKAAF YNCKFIGFQD TLYDYKGLHF FKDCYIPSRT 120 ATFKEP* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01095 | Pectinesterase | 7.0e-20 | 12 | 116 | 122 | + Pectinesterase. | ||
| PLN02304 | PLN02304 | 1.0e-21 | 16 | 116 | 123 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 4.0e-24 | 14 | 120 | 123 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 7.0e-26 | 14 | 116 | 132 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 3.0e-50 | 10 | 116 | 130 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU13228.1 | 5e-34 | 10 | 116 | 91 | 218 | unknown [Glycine max] |
| GenBank | ACU14235.1 | 4e-34 | 10 | 118 | 91 | 220 | unknown [Glycine max] |
| GenBank | ACU18534.1 | 4e-34 | 10 | 114 | 91 | 216 | unknown [Glycine max] |
| EMBL | CBI38547.1 | 2e-32 | 14 | 116 | 93 | 216 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002333446.1 | 4e-32 | 14 | 116 | 93 | 216 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.0000000002 | 12 | 116 | 31 | 152 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 0.000003 | 75 | 116 | 127 | 170 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 0.000003 | 75 | 116 | 127 | 170 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 0.000003 | 75 | 116 | 127 | 170 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_A | 0.000003 | 75 | 116 | 127 | 170 | A Chain A, Pectin Methylesterase From Carrot |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO513714 | 124 | 14 | 116 | 4e-37 |
| GO504417 | 128 | 10 | 116 | 6e-37 |
| FG988714 | 126 | 10 | 114 | 6e-35 |
| CO105222 | 124 | 14 | 116 | 2e-34 |
| BM527879 | 128 | 10 | 116 | 5e-34 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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