Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppb015196m |
Family | CE8 |
Protein Properties | Length: 180 Molecular Weight: 20103.3 Isoelectric Point: 8.6986 |
Chromosome | Chromosome/Scaffold: 2 Start: 23803300 End: 23804047 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 36 | 171 | 1e-38 |
KSVIVYIGGGEYNEKITILQNKLFVIFYGSPTNMPTLTFVGTAQKYGTVNSATVIVESDYFVAANLIIKNSSSKPNGKRVGEQALALRVSGNKLALFNYR LIGFQDKLCDDRGNHFFKDFFIEDTVDFIFGSGKSL |
Full Sequence |
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Protein Sequence Length: 180 Download |
MKMLDTLYFR GFCEVSRVCH IHPCQLMPDY RPSLTKSVIV YIGGGEYNEK ITILQNKLFV 60 IFYGSPTNMP TLTFVGTAQK YGTVNSATVI VESDYFVAAN LIIKNSSSKP NGKRVGEQAL 120 ALRVSGNKLA LFNYRLIGFQ DKLCDDRGNH FFKDFFIEDT VDFIFGSGKS LCLVMPPNL* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 1.0e-25 | 36 | 171 | 137 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 1.0e-26 | 26 | 171 | 156 | + pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-27 | 35 | 171 | 144 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-32 | 38 | 171 | 141 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 2.0e-83 | 35 | 173 | 139 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN78808.1 | 0 | 35 | 173 | 69 | 207 | hypothetical protein [Vitis vinifera] |
EMBL | CBI38547.1 | 0 | 35 | 173 | 94 | 232 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277202.1 | 0 | 35 | 173 | 95 | 233 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002333446.1 | 0 | 36 | 173 | 95 | 232 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336983.1 | 0 | 35 | 174 | 93 | 232 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2ntq_B | 0.000000000003 | 32 | 171 | 29 | 184 | A Chain A, Peanut Peroxidase |
PDB | 2ntq_A | 0.000000000003 | 32 | 171 | 29 | 184 | A Chain A, Peanut Peroxidase |
PDB | 2ntp_B | 0.000000000003 | 32 | 171 | 29 | 184 | A Chain A, Peanut Peroxidase |
PDB | 2ntp_A | 0.000000000003 | 32 | 171 | 29 | 184 | A Chain A, Peanut Peroxidase |
PDB | 2ntb_B | 0.000000000003 | 32 | 171 | 29 | 184 | A Chain A, Crystal Structure Of Pectin Methylesterase In Complex With Hexasaccharide V |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO513714 | 139 | 35 | 173 | 0 |
GO504417 | 139 | 35 | 173 | 0 |
FC884230 | 141 | 35 | 175 | 0 |
FC896493 | 139 | 35 | 173 | 0 |
FC902493 | 139 | 35 | 173 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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