| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 28694.m000663 |
| Family | GH35 |
| Protein Properties | Length: 605 Molecular Weight: 67673.1 Isoelectric Point: 8.0842 |
| Chromosome | Chromosome/Scaffold: 28694 Start: 33229 End: 40316 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 153 | 299 | 8.7e-35 |
| YTTDGGSRETLEKGTIRGDTVFSAVDFATGDDPWPIFNLQKKFNAPGKSPPLSAEFYTGWLTHWGEKIAQTDAEFTASSLEKILSRNGSAVLYMAHGGTN FGFYNGANTGADESDYKPDLTSYDYDAPISESGDVDNAKFNALRRVI | |||
| GH35 | 62 | 153 | 9.59889e-43 |
| FWRDGKPFRIIGGDLHYFRILPQYWEDRLLRAKALGLNTVQTYVPWNLHEPQPGRLVFEGIADLVSFLQLCQKLDLLVMLRPGPYICAGSRY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 605 Download |
| MVTKKRSHPK TTLFLAVIIC LLALAVLVPV VFAPLPSLSH SHSHRHRKVN ARRSFEINDD 60 MFWRDGKPFR IIGGDLHYFR ILPQYWEDRL LRAKALGLNT VQTYVPWNLH EPQPGRLVFE 120 GIADLVSFLQ LCQKLDLLVM LRPGPYICAG SRYTTDGGSR ETLEKGTIRG DTVFSAVDFA 180 TGDDPWPIFN LQKKFNAPGK SPPLSAEFYT GWLTHWGEKI AQTDAEFTAS SLEKILSRNG 240 SAVLYMAHGG TNFGFYNGAN TGADESDYKP DLTSYDYDAP ISESGDVDNA KFNALRRVIG 300 VHSAASLPSV PPNNDKTGYG PIQLHKTTFL FDLLDTINPA DVVESKNPVS MESAGQMFGF 360 LVYVTRYAPK VDGSTLYIPE VHDRGQVFTL CPSDGSSGRP VYAGAIERWS NQKVLLPNSK 420 CASNISLFVL VENMGRVNYG RYMFDRKGIL SSVYLDGRIL NGWRMISLPL HNLNEVPKIN 480 PIIQAVHSTL STRTKLEDYP RSFSIEPAFY TGYFFIEKED QVKDTFISFS GWGKGIAFVN 540 DFNLGRYWPS FGPQCNLYVP SPVLRHGKNV LVILELESPH SELVIHSVSQ PDFKCGSSRL 600 NVHQL |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 0.0006 | 202 | 577 | 393 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| COG1874 | LacA | 2.0e-17 | 62 | 145 | 85 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 2.0e-29 | 52 | 307 | 330 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-47 | 62 | 149 | 88 | + Glycosyl hydrolases family 35. | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-47 | 153 | 302 | 150 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002280228.1 | 0 | 53 | 149 | 49 | 145 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002280228.1 | 0 | 153 | 598 | 235 | 679 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327549.1 | 0 | 53 | 149 | 1 | 103 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002327549.1 | 0 | 153 | 605 | 193 | 643 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527397.1 | 0 | 1 | 605 | 1 | 605 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 153 | 577 | 195 | 599 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 3thd_D | 2e-27 | 51 | 168 | 5 | 122 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 3thd_C | 0 | 153 | 577 | 195 | 599 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 3thd_C | 2e-27 | 51 | 168 | 5 | 122 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 3thd_B | 0 | 153 | 577 | 195 | 599 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
