| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10000589m |
| Family | AA1 |
| Protein Properties | Length: 569 Molecular Weight: 64259.5 Isoelectric Point: 9.8844 |
| Chromosome | Chromosome/Scaffold: 6 Start: 2892068 End: 2894419 |
| Description | laccase 14 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 28 | 554 | 0 |
| AKIHHHTFAIKSKAYTRLCNTKKILTVNGEFPGPTLKAYRGDKLVVNVVNNANYNITLHWHGARQLRNPWSDGPEYVTQCPIRPGESYVYRIDLTVEEGT IWWHAHSQWARATVHGAFIIYPKRGSPYPFPKPHREIPLILGEWWTKKNIMDIPGNANKTGGEPAISDAYTINGQPGYLYPCSKPDTFTITVVRGRRYLL RIINAVMDEELFFAIANHTLTVVAKDGRYLKQFKSNYLMITPGQSMDVLLHANQRSSRYFVAARAYSSAFGAGFDKTTTTAILQYKGVSLNRNQPVLPYL PPYNRTEASTRFTSQFRSPRSSNRPVDVPVKIDTRLLYAISVNLMNCSDNNPCSGPFGKRFSSSVNNISFVNPSLDILRAYYRHIGGVFQEDFPRNPPTV FNYTGENLPFPTRFGTKVVVLDFKTSVELVLQGTNVLASDNHPFHLHGYSFYVVGSGFGNFDSRKDPLKYNLVDPPEETTVGVPRNGWTAIRFVANNPGV WLLHCHIERHATWGMNAVFIVKDGPTK | |||
| Full Sequence |
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| Protein Sequence Length: 569 Download |
| MEFKLNIPNT LETIFFLVVL LTYQIAEAKI HHHTFAIKSK AYTRLCNTKK ILTVNGEFPG 60 PTLKAYRGDK LVVNVVNNAN YNITLHWHGA RQLRNPWSDG PEYVTQCPIR PGESYVYRID 120 LTVEEGTIWW HAHSQWARAT VHGAFIIYPK RGSPYPFPKP HREIPLILGE WWTKKNIMDI 180 PGNANKTGGE PAISDAYTIN GQPGYLYPCS KPDTFTITVV RGRRYLLRII NAVMDEELFF 240 AIANHTLTVV AKDGRYLKQF KSNYLMITPG QSMDVLLHAN QRSSRYFVAA RAYSSAFGAG 300 FDKTTTTAIL QYKGVSLNRN QPVLPYLPPY NRTEASTRFT SQFRSPRSSN RPVDVPVKID 360 TRLLYAISVN LMNCSDNNPC SGPFGKRFSS SVNNISFVNP SLDILRAYYR HIGGVFQEDF 420 PRNPPTVFNY TGENLPFPTR FGTKVVVLDF KTSVELVLQG TNVLASDNHP FHLHGYSFYV 480 VGSGFGNFDS RKDPLKYNLV DPPEETTVGV PRNGWTAIRF VANNPGVWLL HCHIERHATW 540 GMNAVFIVKD GPTKSSRMVK PPRDLPSC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07731 | Cu-oxidase_2 | 3.0e-42 | 419 | 552 | 141 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 5.0e-63 | 17 | 547 | 581 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 3.0e-74 | 11 | 558 | 596 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 5.0e-80 | 30 | 546 | 551 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 28 | 568 | 544 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABE66147.1 | 0 | 1 | 568 | 1 | 569 | laccase family protein/diphenol oxidase family protein [Arabidopsis thaliana] |
| RefSeq | NP_196498.1 | 0 | 1 | 568 | 1 | 569 | LAC14 (laccase 14); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002265344.1 | 0 | 14 | 568 | 7 | 561 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002275352.1 | 0 | 20 | 568 | 22 | 569 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299682.1 | 0 | 11 | 568 | 5 | 563 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 28 | 558 | 1 | 531 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 1asq_A | 0 | 28 | 558 | 1 | 531 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 1asp_B | 0 | 28 | 558 | 1 | 531 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 1asp_A | 0 | 28 | 558 | 1 | 531 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 1aso_B | 0 | 28 | 558 | 1 | 531 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO797675 | 491 | 83 | 569 | 0 |
| DY021254 | 281 | 246 | 518 | 0 |
| EE591979 | 587 | 20 | 564 | 0 |
| EE520491 | 231 | 1 | 227 | 0 |
| EE518210 | 200 | 118 | 317 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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