| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g034610.1 |
| Family | AA1 |
| Protein Properties | Length: 579 Molecular Weight: 64336 Isoelectric Point: 6.8441 |
| Chromosome | Chromosome/Scaffold: 4 Start: 64444990 End: 64447683 |
| Description | laccase 14 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 40 | 564 | 0 |
| VIKETKVTRLCHEKIILAVNRQFPGPTIYARKGDAVVVNGSKNITLHWHDVDQPRNPWSDGPEYITQCPIQPGANFTYHINFTEEEGTLWWHAHSDFDRA TVHGAVVIHPKHGSAYPYPKPHREVPIILGEWWNIDVEQVLLEAQRTGGDVNISDANTINSQPDNFVPCSKNDTYRMLMEHGKTYLLQIINAGLTNDMFF AVAGHHLTVVGTDGHYLKPFTVDHIMISSGQTMNVLLEANRATNGSSDNSRYYMAARPYFTNKGPLVDDKNTTTILEYMDVPASRSAGPPDSLDLPAIND TAAATAYTAQLRSLATKEHQIDMPTEVDEHMLVTISVNTLSLRTNKTCKGPRGDRLSASLNNVSFVAPTVDILDAYYNSISDVYEPNFPDRPHFFFNFTD PNSPKELQLTKRGTKVKVVEYGTVVEVVFQDTSILGAESHPMHLHGFSFYVVGRGFGNFDKDKDLAMYNLVDPPYQNTVTVPAGGWAAIRFRAANPGVWF MHCHFDRHTVWGMDTVFIVKNGKTP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 579 Download |
| MGGVAKMPAA GLCWLMLGVL LAIGVAASPA QASRNTHYDV IKETKVTRLC HEKIILAVNR 60 QFPGPTIYAR KGDAVVVNGS KNITLHWHDV DQPRNPWSDG PEYITQCPIQ PGANFTYHIN 120 FTEEEGTLWW HAHSDFDRAT VHGAVVIHPK HGSAYPYPKP HREVPIILGE WWNIDVEQVL 180 LEAQRTGGDV NISDANTINS QPDNFVPCSK NDTYRMLMEH GKTYLLQIIN AGLTNDMFFA 240 VAGHHLTVVG TDGHYLKPFT VDHIMISSGQ TMNVLLEANR ATNGSSDNSR YYMAARPYFT 300 NKGPLVDDKN TTTILEYMDV PASRSAGPPD SLDLPAINDT AAATAYTAQL RSLATKEHQI 360 DMPTEVDEHM LVTISVNTLS LRTNKTCKGP RGDRLSASLN NVSFVAPTVD ILDAYYNSIS 420 DVYEPNFPDR PHFFFNFTDP NSPKELQLTK RGTKVKVVEY GTVVEVVFQD TSILGAESHP 480 MHLHGFSFYV VGRGFGNFDK DKDLAMYNLV DPPYQNTVTV PAGGWAAIRF RAANPGVWFM 540 HCHFDRHTVW GMDTVFIVKN GKTPKSQMMP RPPHMPKC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 4.0e-43 | 50 | 560 | 552 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| PLN02191 | PLN02191 | 5.0e-64 | 9 | 564 | 592 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 8.0e-71 | 14 | 568 | 590 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-77 | 50 | 568 | 558 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 37 | 578 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001105915.1 | 0 | 34 | 578 | 36 | 584 | putative laccase [Zea mays] |
| RefSeq | XP_002449742.1 | 0 | 29 | 578 | 23 | 560 | hypothetical protein SORBIDRAFT_05g022480 [Sorghum bicolor] |
| RefSeq | XP_002452548.1 | 0 | 1 | 578 | 9 | 590 | hypothetical protein SORBIDRAFT_04g027860 [Sorghum bicolor] |
| RefSeq | XP_002452900.1 | 0 | 1 | 578 | 1 | 578 | hypothetical protein SORBIDRAFT_04g034610 [Sorghum bicolor] |
| RefSeq | XP_002452901.1 | 0 | 1 | 578 | 13 | 585 | hypothetical protein SORBIDRAFT_04g034620 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 50 | 568 | 19 | 536 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1asq_A | 0 | 50 | 568 | 19 | 536 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1asp_B | 0 | 50 | 568 | 19 | 536 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1asp_A | 0 | 50 | 568 | 19 | 536 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aso_B | 0 | 50 | 568 | 19 | 536 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
