| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00068445m |
| Family | AA1 |
| Protein Properties | Length: 576 Molecular Weight: 62957.7 Isoelectric Point: 7.1154 |
| Chromosome | Chromosome/Scaffold: 008533 Start: 661 End: 2962 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 32 | 561 | 0 |
| ANYYDFIIAETNVTRLCHEQAILTVNGQFPGPTIHARRGDVVFVNVHNRGRKNITLHWHGVDQPRNPWFDGPEFITQCPIQPGANFTYRIVFSDEEGTLW WHAHSDFDRATVHGAIVVRPKLGSAYPYPEPHKDIPIILGEWWNVSVQHLLEETMRSGGDFNISDANTINGQPGDLLPCSKKGTFRVPVERGRTYMLRVI NAGLTNDMFFAVAGHNLTVVGSDGHYLKPFTAAHIMIAAGQTMNVLLHADRAADASRYYMAARTFATNTEIPVNNSTATAVLEYTDAPSSAGPPALPDLP AVGDLPAATAYTAQLLSLATDGHPVDVPTRVDERMLVTVSVNVLPCGANETCEGPINGTRFAASLNNVSFVAPAVDILDAYYSSMRGVYEPDFPDRPPLF YNFTAPEPAQELWFTKRGTKVKVVEYGAVVEVVFQGTAILGAEPHPMHLHGFAFYTVGRGFGNFDGSKHPAKYNLVNPPRQNTVSVPAGGWAAIRFRATN PGVWFMHCHFDRHTVWGMDTVFIVKNGKTP | |||
| Full Sequence |
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| Protein Sequence Length: 576 Download |
| MGGVAKIPAA ALWLLLGVVV AATPAQALRN KANYYDFIIA ETNVTRLCHE QAILTVNGQF 60 PGPTIHARRG DVVFVNVHNR GRKNITLHWH GVDQPRNPWF DGPEFITQCP IQPGANFTYR 120 IVFSDEEGTL WWHAHSDFDR ATVHGAIVVR PKLGSAYPYP EPHKDIPIIL GEWWNVSVQH 180 LLEETMRSGG DFNISDANTI NGQPGDLLPC SKKGTFRVPV ERGRTYMLRV INAGLTNDMF 240 FAVAGHNLTV VGSDGHYLKP FTAAHIMIAA GQTMNVLLHA DRAADASRYY MAARTFATNT 300 EIPVNNSTAT AVLEYTDAPS SAGPPALPDL PAVGDLPAAT AYTAQLLSLA TDGHPVDVPT 360 RVDERMLVTV SVNVLPCGAN ETCEGPINGT RFAASLNNVS FVAPAVDILD AYYSSMRGVY 420 EPDFPDRPPL FYNFTAPEPA QELWFTKRGT KVKVVEYGAV VEVVFQGTAI LGAEPHPMHL 480 HGFAFYTVGR GFGNFDGSKH PAKYNLVNPP RQNTVSVPAG GWAAIRFRAT NPGVWFMHCH 540 FDRHTVWGMD TVFIVKNGKT PDAQMLPRPP TMPKC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 6.0e-52 | 43 | 557 | 554 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| PLN02191 | PLN02191 | 5.0e-68 | 48 | 562 | 545 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 7.0e-77 | 48 | 565 | 560 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 7.0e-90 | 48 | 565 | 553 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 31 | 575 | 545 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001105915.1 | 0 | 31 | 575 | 36 | 584 | putative laccase [Zea mays] |
| Swiss-Prot | Q6Z8L2 | 0 | 31 | 575 | 29 | 579 | LAC9_ORYSJ RecName: Full=Putative laccase-9; AltName: Full=Benzenediol:oxygen oxidoreductase 9; AltName: Full=Urishiol oxidase 9; AltName: Full=Diphenol oxidase 9; Flags: Precursor |
| RefSeq | XP_002452548.1 | 0 | 1 | 575 | 9 | 590 | hypothetical protein SORBIDRAFT_04g027860 [Sorghum bicolor] |
| RefSeq | XP_002452900.1 | 0 | 24 | 575 | 29 | 578 | hypothetical protein SORBIDRAFT_04g034610 [Sorghum bicolor] |
| RefSeq | XP_002452901.1 | 0 | 24 | 575 | 41 | 585 | hypothetical protein SORBIDRAFT_04g034620 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 48 | 565 | 19 | 536 | A Chain A, Structure Of The Full-Lenght Enzyme I Of The Pts System From Staphylococcus Carnosus |
| PDB | 1asq_A | 0 | 48 | 565 | 19 | 536 | A Chain A, Structure Of The Full-Lenght Enzyme I Of The Pts System From Staphylococcus Carnosus |
| PDB | 1asp_B | 0 | 48 | 565 | 19 | 536 | A Chain A, Structure Of The Full-Lenght Enzyme I Of The Pts System From Staphylococcus Carnosus |
| PDB | 1asp_A | 0 | 48 | 565 | 19 | 536 | A Chain A, Structure Of The Full-Lenght Enzyme I Of The Pts System From Staphylococcus Carnosus |
| PDB | 1aso_B | 0 | 48 | 565 | 19 | 536 | A Chain A, Structure Of The Full-Lenght Enzyme I Of The Pts System From Staphylococcus Carnosus |
