PlantCAZyme

CAZyme Information

Basic Information
Species	Vitis vinifera
Cazyme ID	GSVIVT01013692001
Family	AA1
Protein Properties	Length: 421 Molecular Weight: 47042.3 Isoelectric Point: 5.0367
Chromosome	Chromosome/Scaffold: 18 Start: 2709744 End: 2714717
Description	laccase 14
View CDS

External Links
NCBI Taxonomy
Plaza
CAZyDB

External Links

NCBI Taxonomy

Plaza

CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
AA1	23	389	0
AFTINGEPGDLVACGGETTHRWLVDYGKTYLLRIVNAVVNSELFFAISEHNLTIVGTDGTYTKPRVTSYIMIAPGQTMDVLITTNQSLSHYYMAARQFVT LESSIAEFNNMTATAILQYRGNYPPPDVPSFPANLPLFHDLDSGLGFLPLLRSLATPEHPVSVPLKITTRMLVTASINKVNYTFEGTEVSHLAASLNNIT FMDPTSSILLAYYRHTSGVYTTDFPDYPPSYYNFTGDTYPPPMSVLATKVKVLNYNESVEIIVQGTNLQGQGEDHPLHLHGYTFYVVGMGRGNFNNETDP KWYNLVDPPERDTITVPKNGWVALRFLANNPGVWLWHCHFDRHLTWGMDTAFIVKNGETPETSILPP

Full Sequence
Protein Sequence Length: 421 Download
MNQYFIAKEF LSNQTVTTLD DIAFTINGEP GDLVACGGET THRWLVDYGK TYLLRIVNAV 60 VNSELFFAIS EHNLTIVGTD GTYTKPRVTS YIMIAPGQTM DVLITTNQSL SHYYMAARQF 120 VTLESSIAEF NNMTATAILQ YRGNYPPPDV PSFPANLPLF HDLDSGLGFL PLLRSLATPE 180 HPVSVPLKIT TRMLVTASIN KVNYTFEGTE VSHLAASLNN ITFMDPTSSI LLAYYRHTSG 240 VYTTDFPDYP PSYYNFTGDT YPPPMSVLAT KVKVLNYNES VEIIVQGTNL QGQGEDHPLH 300 LHGYTFYVVG MGRGNFNNET DPKWYNLVDP PERDTITVPK NGWVALRFLA NNPGVWLWHC 360 HFDRHLTWGM DTAFIVKNGE TPETSILPPL AYMPSCAVQS PIRLEDFQDS IELVNKINVN 420 *

Full Sequence

Protein Sequence Length: 421 Download

MNQYFIAKEF LSNQTVTTLD DIAFTINGEP GDLVACGGET THRWLVDYGK TYLLRIVNAV    60
VNSELFFAIS EHNLTIVGTD GTYTKPRVTS YIMIAPGQTM DVLITTNQSL SHYYMAARQF    120
VTLESSIAEF NNMTATAILQ YRGNYPPPDV PSFPANLPLF HDLDSGLGFL PLLRSLATPE    180
HPVSVPLKIT TRMLVTASIN KVNYTFEGTE VSHLAASLNN ITFMDPTSSI LLAYYRHTSG    240
VYTTDFPDYP PSYYNFTGDT YPPPMSVLAT KVKVLNYNES VEIIVQGTNL QGQGEDHPLH    300
LHGYTFYVVG MGRGNFNNET DPKWYNLVDP PERDTITVPK NGWVALRFLA NNPGVWLWHC    360
HFDRHLTWGM DTAFIVKNGE TPETSILPPL AYMPSCAVQS PIRLEDFQDS IELVNKINVN    420
* 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
PLN02191	PLN02191	7.0e-37	36	375	346	+ L-ascorbate oxidase
pfam07731	Cu-oxidase_2	7.0e-39	245	380	142	+ Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model.
TIGR03388	ascorbase	1.0e-54	46	387	354	+ L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases.
PLN02604	PLN02604	5.0e-55	49	387	351	+ oxidoreductase
TIGR03389	laccase	9.0e-149	23	396	380	+ laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.

Gene Ontology
GO Term	Description
GO:0005507	copper ion binding
GO:0016491	oxidoreductase activity
GO:0055114	oxidation-reduction process

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
EMBL	CAN63252.1	0	8	420	304	742	hypothetical protein [Vitis vinifera]
EMBL	CBI29354.1	0	1	420	1	420	unnamed protein product [Vitis vinifera]
EMBL	CBI29356.1	0	8	420	177	589	unnamed protein product [Vitis vinifera]
RefSeq	XP_002263831.1	0	6	415	179	588	PREDICTED: hypothetical protein [Vitis vinifera]
RefSeq	XP_002263871.1	0	8	420	180	592	PREDICTED: hypothetical protein [Vitis vinifera]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1asq_B	1e-36	27	386	189	536	B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB	1asq_A	1e-36	27	386	189	536	B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB	1asp_B	1e-36	27	386	189	536	B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB	1asp_A	1e-36	27	386	189	536	B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB	1aso_B	1e-36	27	386	189	536	B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector

Hydropathy

EST Download unfiltered results here

Hit

Length

Start

End

EValue

FQ449073

275

372

FQ422739

256

353

FQ416431

239

250

EC949663

253

160

412

FQ441501

147

269

415

Orthologous Group
Species	ID
Arabidopsis lyrata	917686	487747
Arabidopsis thaliana	AT5G48100.1	AT5G09360.1
Brachypodium distachyon	Bradi3g59210.1	Bradi3g59187.1
Brassica rapa	Bra020720	Bra037510
Capsella rubella	Carubv10027828m	Carubv10000589m
Citrus clementina	Ciclev10003795m
Citrus sinensis	orange1.1g036841m
Cucumis sativus	Cucsa.345760.1
Eucalyptus grandis	Eucgr.L01441.1	Eucgr.J00889.1	Eucgr.F02650.1	Eucgr.H04936.1	Eucgr.F04163.1
	Eucgr.F02674.1	Eucgr.H04937.1	Eucgr.F02648.1	Eucgr.F02642.1	Eucgr.F02646.1
	Eucgr.L00623.1	Eucgr.B01273.1	Eucgr.H02579.1	Eucgr.F02649.1	Eucgr.F04160.1
	Eucgr.F04162.1	Eucgr.F02641.1	Eucgr.F04154.1	Eucgr.L01656.1	Eucgr.F02644.1
	Eucgr.L00621.1	Eucgr.C02745.1	Eucgr.J00888.1	Eucgr.F02652.2	Eucgr.F02652.1
	Eucgr.L01343.1	Eucgr.L02310.1	Eucgr.E04216.1	Eucgr.G00841.1	Eucgr.E04217.1
	Eucgr.E04220.1	Eucgr.E04219.1	Eucgr.E04218.1	Eucgr.E04221.1	Eucgr.L01345.1
	Eucgr.E03935.1	Eucgr.F04158.1	Eucgr.F02653.1	Eucgr.E03932.1	Eucgr.F04157.1
	Eucgr.F02642.2	Eucgr.F02649.2
Fragaria vesca	mrna16187.1-v1.0-hybrid	mrna27556.1-v1.0-hybrid	mrna27557.1-v1.0-hybrid	mrna27526.1-v1.0-hybrid	mrna27527.1-v1.0-hybrid
	mrna27523.1-v1.0-hybrid	mrna15091.1-v1.0-hybrid	mrna27531.1-v1.0-hybrid	mrna24290.1-v1.0-hybrid	mrna27522.1-v1.0-hybrid
	mrna17621.1-v1.0-hybrid	mrna11910.1-v1.0-hybrid	mrna24296.1-v1.0-hybrid	mrna05430.1-v1.0-hybrid	mrna24295.1-v1.0-hybrid
	mrna02152.1-v1.0-hybrid	mrna24292.1-v1.0-hybrid	mrna08067.1-v1.0-hybrid	mrna11940.1-v1.0-hybrid
Glycine max	Glyma11g36058.1	Glyma16g27480.1	Glyma10g36320.1	Glyma20g31280.1	Glyma10g36310.1
	Glyma20g31270.1
Gossypium raimondii	Gorai.009G260400.1	Gorai.009G260400.2	Gorai.005G076600.2	Gorai.005G076600.1	Gorai.005G076600.3
	Gorai.009G260600.1	Gorai.009G261300.1	Gorai.009G261000.1	Gorai.009G260800.1	Gorai.010G130100.1
	Gorai.009G260400.3	Gorai.009G261100.1	Gorai.009G261500.1
Linum usitatissimum	Lus10041067	Lus10026812	Lus10036070	Lus10041066
Malus domestica	MDP0000546342	MDP0000143780	MDP0000168293	MDP0000318606	MDP0000262848
	MDP0000090732	MDP0000242301	MDP0000252988	MDP0000724206	MDP0000419919
	MDP0000188477	MDP0000263468	MDP0000148967
Manihot esculenta	cassava4.1_028126m	cassava4.1_005540m	cassava4.1_026478m	cassava4.1_027769m
Medicago truncatula	Medtr3g101640.1.30.558	Medtr3g101640.1.30.558	Medtr2g008330.1
Mimulus guttatus	mgv1a018195m	mgv1a019066m	mgv1a021399m	mgv1a003690m	mgv1a004060m
Oryza sativa	LOC_Os02g51440.1	LOC_Os11g47390.1
Panicum virgatum	Pavirv00068445m	Pavirv00039877m	Pavirv00029470m	Pavirv00044315m	Pavirv00029948m
Phaseolus vulgaris	Phvul.004G086400.1	Phvul.007G086400.1	Phvul.007G086500.1	Phvul.004G087000.1
Populus trichocarpa	Potri.005G200600.1	Potri.005G200500.1	Potri.011G071100.1	Potri.019G088900.1	Potri.019G088500.1
	Potri.019G088600.1	Potri.019G088800.1	Potri.019G088700.1	Potri.019G088700.2	Potri.005G200700.1
	Potri.001G206200.1	Potri.005G200500.2	Potri.005G200600.2
Prunus persica	ppa016123m	ppa003529m	ppa003546m	ppa016865m	ppa015996m
	ppa025323m	ppa003489m	ppa014804m	ppa003580m	ppa003663m
	ppa003583m	ppa025087m
Ricinus communis	28644.m000909	29703.m001524	29703.m001527	29703.m001531	28660.m000189
	29703.m001530	28644.m000940	28644.m000937	28644.m000938
Setaria italica	Si016752m	Si007952m	Si019864m	Si019724m
Sorghum bicolor	Sb04g027860.1	Sb04g034620.1	Sb04g034610.1	Sb04g027850.1	Sb10g030340.1
	Sb05g022480.1
Thellungiella halophila	Thhalv10003921m	Thhalv10015612m
Vitis vinifera	GSVIVT01001603001	GSVIVT01012329001	GSVIVT01013689001	GSVIVT01013695001	GSVIVT01013694001
	GSVIVT01012332001	GSVIVT01034783001	GSVIVT01012343001	GSVIVT01034842001	GSVIVT01034817001
	GSVIVT01001604001	GSVIVT01001614001	GSVIVT01012346001	GSVIVT01013687001.321.754	GSVIVT01013687001.321.754
	GSVIVT01012359001	GSVIVT01034828001

Orthologous Group

Species

Arabidopsis lyrata

917686

487747

Arabidopsis thaliana

AT5G48100.1

AT5G09360.1

Brachypodium distachyon

Bradi3g59210.1

Bradi3g59187.1

Brassica rapa