Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.117040.1 |
Family | AA7 |
Protein Properties | Length: 248 Molecular Weight: 27165 Isoelectric Point: 9.3229 |
Chromosome | Chromosome/Scaffold: 00995 Start: 773739 End: 774909 |
Description | cytokinin oxidase 3 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA7 | 57 | 247 | 5.8e-27 |
YGNMVKETPAAVLEPSSINDVVQLISYAYNNPIPFHIAARGQGHSVRGQAMAKNGVVIDMSALRRNRKTPRIVVSCRRWTTGEFYVDVGGEQLWIEVLNA TLGYGMTPVSWTDYLYITVGGTLSNAGISGQSFRYGPQVSNVVEMDVVTGKGNMMTCSPRKNCELFHAVLGGLGQFGIIARARIALEPAPT |
Full Sequence |
---|
Protein Sequence Length: 248 Download |
MNENLPVPAY FIITFFISRL KSSINKSKAW TTTTTVNQQP NNLQNDPETL TIASSDYGNM 60 VKETPAAVLE PSSINDVVQL ISYAYNNPIP FHIAARGQGH SVRGQAMAKN GVVIDMSALR 120 RNRKTPRIVV SCRRWTTGEF YVDVGGEQLW IEVLNATLGY GMTPVSWTDY LYITVGGTLS 180 NAGISGQSFR YGPQVSNVVE MDVVTGKGNM MTCSPRKNCE LFHAVLGGLG QFGIIARARI 240 ALEPAPTR |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01679 | bact_FAD_ox | 0.0009 | 55 | 240 | 187 | + FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. | ||
TIGR01678 | FAD_lactone_ox | 2.0e-6 | 65 | 245 | 187 | + sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1. | ||
COG0277 | GlcD | 1.0e-24 | 46 | 246 | 207 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
pfam01565 | FAD_binding_4 | 2.0e-26 | 65 | 214 | 151 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
PLN02441 | PLN02441 | 1.0e-126 | 3 | 248 | 248 | + cytokinin dehydrogenase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0016491 | oxidoreductase activity |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05760.1 | 0 | 1 | 248 | 1 | 259 | FAD linked oxidase, N-terminal [Medicago truncatula] |
GenBank | ACM79256.1 | 0 | 1 | 246 | 1 | 245 | cytokinin oxidase/dehydrogenase [Gossypium hirsutum] |
RefSeq | XP_002279519.1 | 0 | 1 | 248 | 1 | 248 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308300.1 | 0 | 1 | 248 | 1 | 250 | cytokinin oxidase [Populus trichocarpa] |
RefSeq | XP_002514119.1 | 0 | 1 | 248 | 1 | 252 | gulonolactone oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s1d_A | 0 | 25 | 248 | 11 | 230 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3kjm_A | 0 | 25 | 248 | 11 | 230 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 2qpm_A | 0 | 25 | 248 | 11 | 230 | A Chain A, Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Benzylurea Inhibitor Cpbu |
PDB | 1w1s_A | 0 | 25 | 248 | 29 | 248 | A Chain A, Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Benzylurea Inhibitor Cpbu |
PDB | 1w1r_A | 0 | 25 | 248 | 29 | 248 | A Chain A, Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Benzylurea Inhibitor Cpbu |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
CO117912 | 249 | 1 | 246 | 0 |
JG470904 | 248 | 1 | 248 | 0 |
GO373859 | 242 | 12 | 248 | 0 |
CO119330 | 231 | 1 | 228 | 0 |
JG555633 | 228 | 1 | 228 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|