CAZyme Information

Basic Information
SpeciesCucumis sativus
Cazyme IDCucsa.229010.2
FamilyGH35
Protein PropertiesLength: 712 Molecular Weight: 78734.4 Isoelectric Point: 7.7379
ChromosomeChromosome/Scaffold: 01938 Start: 267 End: 6508
Descriptionbeta galactosidase 1
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH3582060
  GISFRTDNAPFKFQMERFTRKIVNMMKAERLYESQGGPIILSQIENEYGPMEYELGAPGKAYSKWAAQMALGLGTGVPWVMCKQDDAPDPIINTCNGFYC
  DYFSPNKAYKPKMWTEAWTGWFTQFGGAVPHRPAEDMAFAVARFIQKGGALINYYMYHGGTNFGRTAGGPFIATSYDYDAPIDEYGLLRQPKWGHLKDL
Full Sequence
Protein Sequence     Length: 712     Download
MELWYIPGIS FRTDNAPFKF QMERFTRKIV NMMKAERLYE SQGGPIILSQ IENEYGPMEY    60
ELGAPGKAYS KWAAQMALGL GTGVPWVMCK QDDAPDPIIN TCNGFYCDYF SPNKAYKPKM    120
WTEAWTGWFT QFGGAVPHRP AEDMAFAVAR FIQKGGALIN YYMYHGGTNF GRTAGGPFIA    180
TSYDYDAPID EYGLLRQPKW GHLKDLNRAI KLCEPALVSG DPIVTRLGNY QEAHVFKSKS    240
GACAAFLSNY NPRSYATVAF GNMHYNIPPW SISILPDCKN TVFNTARVGA QTAIMKMSPV    300
PMHESFSWQA YNEEPASYNE KAFTTVGLLE QINTTRDATD YLWYTTDVHI DANEGFLRSG    360
KYPVLTVLSA GHAMHVFVNG QLAGTAYGSL DFPKLTFSRG VNLRAGNNKI ALLSIAVGLP    420
NVGPHFEMWN AGILGPVNLN GLDEGRRDLT WQKWTYKIGL DGEAMSLHSL SGSSSVEWIQ    480
GSLVAQKQPL TWFKTTFNAP AGNSPLALDM GSMGKGQIWL NGQSLGRYWP AYKSTGSCGS    540
CDYTGTYNEK KCSSNCGEAS QRWYHVPRSW LNPTGNLLVV FEEWGGDPNG IHLVRRDVDS    600
VCVNINEWQP TLMNWQMQSS GKVNKPLRPK AHLSCGPGQK ISSVKFASFG TPEGECGSFR    660
EGSCHAHHSY DAFQRTCVGQ NFCTVTVAPE MFGGDPCPNV MKKLSVEVIC S*            720
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd04082CBM35_pectate_lyase-like0.000837342258+
pfam02140Gal_Lectin6.0e-2163371082+
pfam01301Glyco_hydro_352.0e-853210224+
PLN03059PLN0305903711710+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005529Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah]
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankABK96254.103711138846unknown [Populus trichocarpa x Populus deltoides]
GenBankABV32545.103711133841beta-galactosidase protein 2 [Prunus persica]
EMBLCAC44500.103711135843beta-galactosidase [Fragaria x ananassa]
RefSeqXP_002327432.103711131839predicted protein [Populus trichocarpa]
RefSeqXP_002527409.103711137845beta-galactosidase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3d3a_A0.000000000000039206119325A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron
PDB4e8d_B0.00000000143193145313A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron
PDB4e8d_B0.0002341596385584A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron
PDB4e8d_A0.00000000143193145313A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO78060260735960
HO77816060036000
HO79555251135120
HO784793321343540
GW8689563162926070
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_014_00261.4Aquca_034_00110.2
Brassica rapaBra013956.94.331Bra015236Bra003370Bra018721Bra013956.94.331
Carica papayaevm.model.supercontig_18.156
Citrus clementinaCiclev10007838mCiclev10004420mCiclev10000553m
Citrus sinensisorange1.1g007315morange1.1g006468morange1.1g004668morange1.1g005404m
Cucumis sativusCucsa.397380.5Cucsa.342700.4Cucsa.256570.2Cucsa.397380.6
Eucalyptus grandisEucgr.A01556.1.101.314Eucgr.A01556.1.101.314Eucgr.A01181.1
Fragaria vescamrna15210.1-v1.0-hybrid
Glycine maxGlyma15g35931.1Glyma09g21980.2.142.289Glyma09g21980.2.142.289Glyma14g07700.3
Gossypium raimondiiGorai.003G059500.4Gorai.011G065300.5Gorai.003G059500.3Gorai.003G059500.2Gorai.013G223000.1.124.295
Gorai.013G223000.1.124.295
Linum usitatissimumLus10023977.605.818
Manihot esculentacassava4.1_029736m
Medicago truncatulaMedtr1g018200.2AC235665_1070.1.117.327AC235665_1070.1.117.327
Mimulus guttatusmgv1a002308m
Oryza sativaLOC_Os03g15020.3
Panicum virgatumPavirv00064750m
Picea abiesMA_217488g0010MA_14774g0010
Populus trichocarpaPotri.007G018100.3Potri.006G144500.6Potri.001G200400.4Potri.001G200400.5
Prunus persicappa002177m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny