| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g004668m |
| Family | GH35 |
| Protein Properties | Length: 739 Molecular Weight: 79828.2 Isoelectric Point: 7.1864 |
| Chromosome | Chromosome/Scaffold: 00014 Start: 1490287 End: 1496410 |
| Description | beta-galactosidase 8 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 17 | 227 | 0 |
| GFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAGKSYIKWAAGMALSLDTGVPWVMCQQSDAPDP IINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPFISTSYDYDAPLDEYGLIRQ PKWGHLKDLHK | |||
| Full Sequence |
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| Protein Sequence Length: 739 Download |
| MLIFALVHMF VLNGTLGFPL WLHFIPGIQF RTDNEPFKAE MQRFTAKIVD MMKQEKLYAS 60 QGGPIILSQI ENEYGNIDSA YGAAGKSYIK WAAGMALSLD TGVPWVMCQQ SDAPDPIINT 120 CNGFYCDQFT PNSNNKPKMW TENWSGWFLS FGGAVPYRPV EDLAFAVARF FQRGGTFQNY 180 YMYHGGTNFD RTSGGPFIST SYDYDAPLDE YGLIRQPKWG HLKDLHKAIK LCEAALVATD 240 PTYPSLGPNL EATVYKTGSG LCSAFLANIG TNSDVTVKFN GNSYLLPAWS VSILPDCKNV 300 VFNTAKINSV TLVPSFSRQS LQVAADSSDA IGSGWSYINE PVGISKDDAF TKPGLLEQIN 360 TTADQSDYLW YSLSTNIKAD EPLLEDGSKT VLHVQSLGHA LHAFINGKLV GSGYGSSSNA 420 KVTVDFPIAL APGKNTFDLL SLTVGLQNYG AFYEKTGAGI TGPVQLKGSG NGTNIDLSSQ 480 QWTYQTGLKG EELNFPSGSS TQWDSKSTLP KLQPLVWYKT TFDAPAGSEP VAIDFTGMGK 540 GEAWVNGQSI GRYWPTYVSQ NGGCTDSCNY RGAYSSNKCL KNCGKPSQSL YHVPRSWLKS 600 SGNTLVLFEE IGGDPTKISF VTKQLGSSLC SHVTDSHPLP VDMWGSDSKI QRKPGPVLSL 660 ECPNPNQVIS SIKFASFGTP LGTCGSFSRG RCSSARSLSV VRQACVGSKS CSIGVSVNTF 720 GDPCKGVMKS LAVEASCT* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 0.007 | 26 | 219 | 248 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02837 | Glyco_hydro_2_N | 0.003 | 491 | 552 | 65 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| pfam02140 | Gal_Lectin | 3.0e-24 | 660 | 737 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-100 | 17 | 229 | 228 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 17 | 738 | 726 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0007155 | cell adhesion |
| GO:0009289 | pilus |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC44501.1 | 0 | 17 | 737 | 130 | 839 | beta-galactosidase [Fragaria x ananassa] |
| EMBL | CBI16297.1 | 0 | 17 | 738 | 126 | 846 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002285084.1 | 0 | 17 | 738 | 71 | 791 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002314274.1 | 0 | 17 | 737 | 132 | 848 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530296.1 | 0 | 17 | 738 | 125 | 842 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 4e-17 | 17 | 225 | 108 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.005 | 386 | 612 | 395 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.000000001 | 17 | 243 | 111 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 0.000000001 | 17 | 243 | 111 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 614 | 17 | 625 | 0 |
| HO780602 | 622 | 17 | 623 | 0 |
| HO795552 | 522 | 17 | 535 | 0 |
| DY670200 | 291 | 17 | 307 | 0 |
| DR520920 | 292 | 20 | 311 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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