| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.003G059500.4 |
| Family | GH35 |
| Protein Properties | Length: 690 Molecular Weight: 76945.5 Isoelectric Point: 7.3799 |
| Chromosome | Chromosome/Scaffold: 03 Start: 10296576 End: 10301425 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 1 | 187 | 0 |
| MRRFTKMIVNMMKAERLFESQGGPIILSQIENEYGPVEYEIGEPGKAYTDWAAKMAVRLGTGVPWVMCKQDDAPDPIINTCNGFYCDYFSPNKAYKPKMW TEAWTGWFTEFGGAVPYRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHR | |||
| Full Sequence |
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| Protein Sequence Length: 690 Download |
| MRRFTKMIVN MMKAERLFES QGGPIILSQI ENEYGPVEYE IGEPGKAYTD WAAKMAVRLG 60 TGVPWVMCKQ DDAPDPIINT CNGFYCDYFS PNKAYKPKMW TEAWTGWFTE FGGAVPYRPA 120 EDMAFSVARF IQKGGSFINY YMYHGGTNFG RTAGGPFIAT SYDYDAPLDE YGLLRQPKWG 180 HLKDLHRAIK LCESALVSGD PTVMQLGVHQ EAHVFNYKSG GCAAFLANYD PKSFAKVAFR 240 DMHYNLPPWS ISILPDCKNT VYNTARVGAQ IARKKMVPVP LHGGFSWQAY NEETASDADS 300 SFTMVGLLEQ INTTRDSTDY LWYTTDIEID PNEEFFRNGK SPILTILSAG HALHVFVNGQ 360 LSGSSYGSLE FPKLTFSQGV NMRAGINKIA LLSIAVGLPN VGPHFETWNA GVLGPVTLNG 420 LNEGRRDLSW QKWSYKIGLK GEALNLHSLS GSSSVEWAEG SLVAQRQPLT WYKTTFNAPA 480 GNAPLALDMR SMGKGQIWIN GQSIGRHWPA YKASGNCSVC NYAGTYDENK CRTNCEEASQ 540 RWYHVPRSWL NPTGNLLVVI EEWGGDPNAI SLVRRETDSV CADIYEWQPT LMNYQMHASG 600 KADKPLRPKV HLECDMGQKI SAVKFVSFGT PEGVCGSYRE GSCHAYHSYD AFNRVCYICL 660 IAYMQVTRHL HLLAKLTLLH LHFSCCCLS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 0.002 | 7 | 179 | 215 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 0.002 | 612 | 656 | 49 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-79 | 1 | 189 | 204 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 656 | 657 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK96254.1 | 0 | 1 | 656 | 157 | 812 | unknown [Populus trichocarpa x Populus deltoides] |
| EMBL | CAC44500.1 | 0 | 1 | 656 | 154 | 809 | beta-galactosidase [Fragaria x ananassa] |
| RefSeq | XP_002327432.1 | 0 | 1 | 656 | 150 | 805 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329051.1 | 0 | 1 | 656 | 141 | 796 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527409.1 | 0 | 1 | 656 | 156 | 811 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.000000000000004 | 20 | 185 | 149 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.000000006 | 22 | 172 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.003 | 317 | 577 | 382 | 586 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.000000006 | 22 | 172 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO780602 | 584 | 1 | 575 | 0 |
| HO778160 | 577 | 1 | 575 | 0 |
| HO795552 | 492 | 1 | 491 | 0 |
| HO784793 | 322 | 13 | 334 | 0 |
| GW868956 | 315 | 272 | 586 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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