| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g15020.3 |
| Family | GH35 |
| Protein Properties | Length: 703 Molecular Weight: 75489.5 Isoelectric Point: 5.0078 |
| Chromosome | Chromosome/Scaffold: 3 Start: 8195946 End: 8202168 |
| Description | beta-galactosidase 8 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 1 | 187 | 0 |
| MQRFTEKVVDTMKGAGLYASQGGPIILSQIENEYGNIDSAYGAAGKAYMRWAAGMAVSLDTGVPWVMCQQSDAPDPLINTCNGFYCDQFTPNSKSKPKMW TENWSGWFLSFGGAVPYRPAEDLAFAVARFYQRGGTFQNYYMYHGGTNFGRSTGGPFIATSYDYDAPIDEYGMVRQPKWGHLRDVHK | |||
| Full Sequence |
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| Protein Sequence Length: 703 Download |
| MQRFTEKVVD TMKGAGLYAS QGGPIILSQI ENEYGNIDSA YGAAGKAYMR WAAGMAVSLD 60 TGVPWVMCQQ SDAPDPLINT CNGFYCDQFT PNSKSKPKMW TENWSGWFLS FGGAVPYRPA 120 EDLAFAVARF YQRGGTFQNY YMYHGGTNFG RSTGGPFIAT SYDYDAPIDE YGMVRQPKWG 180 HLRDVHKAIK LCEPALIAAE PSYSSLGQNT EATVYQTADN SICAAFLANV DAQSDKTVKF 240 NGNTYKLPAW SVSILPDCKN VVLNTAQINS QVTTSEMRSL GSSIQDTDDS LITPELATAG 300 WSYAIEPVGI TKENALTKPG LMEQINTTAD ASDFLWYSTS IVVKGDEPYL NGSQSNLLVN 360 SLGHVLQIYI NGKLAGSAKG SASSSLISLQ TPVTLVPGKN KIDLLSTTVG LSNYGAFFDL 420 VGAGVTGPVK LSGPNGALNL SSTDWTYQIG LRGEDLHLYN PSEASPEWVS DNAYPTNQPL 480 IWYKTKFTAP AGDDPVAIDF TGMGKGEAWV NGQSIGRYWP TNLAPQSGCV NSCNYRGAYS 540 SNKCLKKCGQ PSQTLYHVPR SFLQPGSNDL VLFEQFGGDP SMISFTTRQT SSICAHVSEM 600 HPAQIDSWIS PQQTSQTQGP ALRLECPREG QVISNIKFAS FGTPSGTCGN YNHGECSSSQ 660 ALAVVQEACV GMTNCSVPVS SNNFGDPCSG VTKSLVVEAA CS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02837 | Glyco_hydro_2_N | 0.009 | 471 | 517 | 50 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| pfam02140 | Gal_Lectin | 2.0e-24 | 624 | 701 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-83 | 1 | 189 | 204 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 702 | 707 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005618 | cell wall |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95028.1 | 0 | 1 | 702 | 95 | 796 | Beta-galactosidase precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABF95029.1 | 0 | 1 | 702 | 1 | 702 | Beta-galactosidase precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAZ24672.1 | 0 | 1 | 702 | 160 | 861 | hypothetical protein OsJ_08441 [Oryza sativa Japonica Group] |
| RefSeq | NP_001049591.1 | 0 | 1 | 702 | 255 | 956 | Os03g0255100 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | Q10NX8 | 0 | 1 | 702 | 157 | 858 | BGAL6_ORYSJ RecName: Full=Beta-galactosidase 6; Short=Lactase 6; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 5e-17 | 15 | 185 | 144 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.00004 | 353 | 577 | 396 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.00000000008 | 22 | 172 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.00006 | 367 | 590 | 411 | 586 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.00000000008 | 22 | 172 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO882786 | 357 | 316 | 672 | 0 |
| GO837965 | 339 | 274 | 612 | 0 |
| GT044618 | 327 | 305 | 631 | 0 |
| GT044618 | 23 | 627 | 649 | 0.004 |
| GT044618 | 10 | 650 | 659 | 0.004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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