| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01011660001 |
| Family | CE11 |
| Protein Properties | Length: 314 Molecular Weight: 34273.1 Isoelectric Point: 6.4136 |
| Chromosome | Chromosome/Scaffold: 1 Start: 5477593 End: 5485134 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE11 | 25 | 309 | 0 |
| QQTIAGCIERSGITLHSGRVARVKIWPECAGVGRYFDFRSNFIHPSVDYVQESPLCTTLCKDGYKVRTVEHLLSALEAMGVDNCRIEVEGLNGEESSVEV PIFDGSAKEWVEAIEQVGLKVATDQGGNSCEKMIPFLIEPVHVHRNDSFIAAFPYPKVQIIYGIDFPQVPAIGCQWFSSASLDDSFYTSEIGPSRTFCVY EEVEKLRNLGLIKGGSTDSAIVCSASKGWLNPPLRFPDEPCRHKVLDLIGDLSLFARHGSQGFPVAQIVGYKGGHALHADFVRRL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 314 Download |
| MSVSSALNAF KSSALISWKS LGKLQQTIAG CIERSGITLH SGRVARVKIW PECAGVGRYF 60 DFRSNFIHPS VDYVQESPLC TTLCKDGYKV RTVEHLLSAL EAMGVDNCRI EVEGLNGEES 120 SVEVPIFDGS AKEWVEAIEQ VGLKVATDQG GNSCEKMIPF LIEPVHVHRN DSFIAAFPYP 180 KVQIIYGIDF PQVPAIGCQW FSSASLDDSF YTSEIGPSRT FCVYEEVEKL RNLGLIKGGS 240 TDSAIVCSAS KGWLNPPLRF PDEPCRHKVL DLIGDLSLFA RHGSQGFPVA QIVGYKGGHA 300 LHADFVRRLS GIS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 2.0e-64 | 25 | 310 | 320 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 2.0e-69 | 25 | 309 | 292 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| COG0774 | LpxC | 3.0e-81 | 24 | 309 | 296 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| pfam03331 | LpxC | 2.0e-83 | 25 | 309 | 290 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| PRK13186 | lpxC | 2.0e-101 | 25 | 309 | 293 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN61403.1 | 0 | 1 | 313 | 1 | 367 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI26831.1 | 0 | 1 | 313 | 1 | 313 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_173874.2 | 0 | 12 | 310 | 26 | 324 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | XP_002281269.1 | 0 | 1 | 296 | 1 | 296 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002315856.1 | 0 | 22 | 297 | 4 | 280 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4fw7_D | 2e-36 | 25 | 309 | 7 | 277 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 4fw7_C | 2e-36 | 25 | 309 | 7 | 277 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 4fw7_B | 2e-36 | 25 | 309 | 7 | 277 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 4fw7_A | 2e-36 | 25 | 309 | 7 | 277 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 4fw6_D | 2e-36 | 25 | 309 | 7 | 277 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | UDPACYLGLCNACDEACETYL-RXN | EC-3.5.1.108 | UDP-3-O-acyl-N-acetylglucosamine deacetylase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| CK277774 | 278 | 8 | 285 | 0 |
| GE608060 | 276 | 5 | 280 | 0 |
| GT006630 | 265 | 22 | 285 | 0 |
| EL383503 | 283 | 9 | 288 | 0 |
| CK277774 | 30 | 284 | 313 | 0.0002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |