Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G187900.1 |
Family | GH47 |
Protein Properties | Length: 577 Molecular Weight: 65973.2 Isoelectric Point: 7.1413 |
Chromosome | Chromosome/Scaffold: 06 Start: 44468630 End: 44474794 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 47 | 481 | 0 |
MFYHAYENYMKHAFPHDELKPLTKSFTDSLSELGNLKLQHLPRNYNGSALTLIESLSSLVIMGNNTEFERAVTWLSENLTFNIDARINLFECNIRVLGGL ISAHILATDSTNRLVQGCYKNQLLNLAEDLGRRFLPAFDTPTGLPYAWVNLKYGVMEDETPETSTSGCGSLILEMGALSRLTGDPRYESAALRALRKLWS MRSSLNLLGTTLDVTTGEWIEYSSGIGAGVDSFYEYLCKAYILFGKEDYWRMFHSAYLAVQKYFRHGPWYHEADMRTGKATYWQLTSLQAFWPGLQVLVG DIGAANSSHREFFYVWKKFGVIPERYLLDHQMLHPTEKYYPLRPELAESTFYLYQATKDPWYIQVGESIVNSLNLYTKVKGGFASVRDVTTMQLEDHQHS FFLAETCKYLYLLFDDSFLVDRNYIFTTEGHPLPI |
Full Sequence |
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Protein Sequence Length: 577 Download |
MLLSRSYGAW LVLFLLISPA FIAPSMSQID SHWAAKKRHM REKVRKMFYH AYENYMKHAF 60 PHDELKPLTK SFTDSLSELG NLKLQHLPRN YNGSALTLIE SLSSLVIMGN NTEFERAVTW 120 LSENLTFNID ARINLFECNI RVLGGLISAH ILATDSTNRL VQGCYKNQLL NLAEDLGRRF 180 LPAFDTPTGL PYAWVNLKYG VMEDETPETS TSGCGSLILE MGALSRLTGD PRYESAALRA 240 LRKLWSMRSS LNLLGTTLDV TTGEWIEYSS GIGAGVDSFY EYLCKAYILF GKEDYWRMFH 300 SAYLAVQKYF RHGPWYHEAD MRTGKATYWQ LTSLQAFWPG LQVLVGDIGA ANSSHREFFY 360 VWKKFGVIPE RYLLDHQMLH PTEKYYPLRP ELAESTFYLY QATKDPWYIQ VGESIVNSLN 420 LYTKVKGGFA SVRDVTTMQL EDHQHSFFLA ETCKYLYLLF DDSFLVDRNY IFTTEGHPLP 480 ILSSWHERLP AAYIPTNWTY AKSEQQTRRA SAMSLQVCPA ITLRSGYGVQ QVESACHIPD 540 SRADHRCFSD EECGIDSSTC RRRSCSMAGY CGLWIQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 5.0e-83 | 41 | 481 | 476 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 1.0e-161 | 47 | 481 | 472 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_564288.1 | 0 | 11 | 574 | 10 | 571 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002280345.1 | 0 | 2 | 575 | 1 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318019.1 | 0 | 40 | 575 | 1 | 528 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321565.1 | 0 | 2 | 575 | 1 | 565 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511454.1 | 0 | 4 | 575 | 3 | 573 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 21 | 482 | 1 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayr_A | 0 | 38 | 479 | 11 | 433 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayq_A | 0 | 38 | 479 | 11 | 433 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayp_A | 0 | 38 | 479 | 11 | 433 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayo_A | 0 | 38 | 479 | 11 | 433 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |