| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g028330.1 |
| Family | GH47 |
| Protein Properties | Length: 574 Molecular Weight: 65007.9 Isoelectric Point: 6.0802 |
| Chromosome | Chromosome/Scaffold: 4 Start: 58429857 End: 58434433 |
| Description | Glycosyl hydrolase family 47 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH47 | 49 | 477 | 0 |
| MFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLNLEHLPQDYSGSALTLVESLSSLVVLGNLTEFERGVLWLSENLTFDVDARINLFECNIRLLGGL ISAHILAKDYNSQFKHGLYQDQLLHLAESLGNRFLPAFETPTGLPYYGVMENETTETSTSGCGSLILEMGVLSRLTGDSRYEAAALRALRKLWSMRSSLN LVGTTLDVLTGKWIEYSSGIGAGVDSFYEYLIKAYILFGSDDYWDMFHSAYLAVQKYFRHGPWYHEADMRTGEATHWQLTSLQAFWPGLQTLLGDVTAAN LSHREFYNIWQRFGVLPERYLLDYGMLHPTEKYYPLRPEFAESTFYLYQATKDPWYLEVGEAIVGSLNYYTKVDGGFASVRDVSTMKLEDHQHSFFLSET CKYLFLLYDDSFLRNQNYIFTTEGHPLPI | |||
| Full Sequence |
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| Protein Sequence Length: 574 Download |
| MRSPGPRLPA PARLAVAALL LAALTGLAVG ADGYGRARRL HMKTKVLEMF YHAYDNYMTY 60 AFPHDELKPL TKSFTDSLSE LGNLNLEHLP QDYSGSALTL VESLSSLVVL GNLTEFERGV 120 LWLSENLTFD VDARINLFEC NIRLLGGLIS AHILAKDYNS QFKHGLYQDQ LLHLAESLGN 180 RFLPAFETPT GLPYYGVMEN ETTETSTSGC GSLILEMGVL SRLTGDSRYE AAALRALRKL 240 WSMRSSLNLV GTTLDVLTGK WIEYSSGIGA GVDSFYEYLI KAYILFGSDD YWDMFHSAYL 300 AVQKYFRHGP WYHEADMRTG EATHWQLTSL QAFWPGLQTL LGDVTAANLS HREFYNIWQR 360 FGVLPERYLL DYGMLHPTEK YYPLRPEFAE STFYLYQATK DPWYLEVGEA IVGSLNYYTK 420 VDGGFASVRD VSTMKLEDHQ HSFFLSETCK YLFLLYDDSF LRNQNYIFTT EGHPLPIRST 480 WHEKFPAAYV PSNWTFVKDE IQPIRVSALS SQVCPETIFR KSVGTPWESA CHVPDAHASH 540 RCRTDDDCGI EAITCKKRTC SMAGYCGLWL VIY* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 1.0e-57 | 45 | 477 | 484 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 3.0e-136 | 49 | 477 | 472 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC73977.1 | 0 | 32 | 573 | 38 | 585 | hypothetical protein OsI_08885 [Oryza sativa Indica Group] |
| RefSeq | NP_001048080.1 | 0 | 32 | 573 | 38 | 585 | Os02g0741300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002321565.1 | 0 | 34 | 571 | 28 | 566 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002454305.1 | 0 | 1 | 573 | 1 | 573 | hypothetical protein SORBIDRAFT_04g028330 [Sorghum bicolor] |
| RefSeq | XP_002511454.1 | 0 | 31 | 572 | 28 | 575 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 31 | 477 | 13 | 465 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fo3_A | 0 | 46 | 477 | 14 | 456 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fo2_A | 0 | 46 | 477 | 14 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 46 | 477 | 14 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1x9d_A | 0 | 46 | 477 | 92 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
