Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si013487m |
Family | GH47 |
Protein Properties | Length: 575 Molecular Weight: 65029.3 Isoelectric Point: 6.0509 |
Chromosome | Chromosome/Scaffold: 6 Start: 1248607 End: 1254826 |
Description | alpha-mannosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 108 | 540 | 0 |
AMLHAWNSYVKYAWGHDELQPQSKNGVNSFGGLGATLVDSLDTLYIMGLKEEFKKARDWVAESLDFDKDYEASVFETTIRVVGGLLSAYDLSADKIFLEK ARDITDRLLPAWDTSSGIPYNRINLAQGKASNPGWNGGNSILADSGTEQLEFIALSQRTGDQKYQQKVENVIRQFQKIFPSDGLLPININPHSGAVKSYS TITFGAMGDSFYEYLLKVWIQGNKTESVKHYRQMWETSMEGLLSLTRKTSPSNFYYVCEKNGDSLSEKMDELACFVPGMLALGASGYSPEKAEQIMNLAE ELAWTCYNFYQSTPTKLAGENYYFHGGQDMVVGTSWNILRPETIESLMYLWRLTGNKTYQDWGWDIFQAFEKNSRIESGYVGLKDVNTGTKDDMMQSFFL AETLKYLYLLFSPPSLISFDEWVFNTEAHPLKI |
Full Sequence |
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Protein Sequence Length: 575 Download |
MGRRSHSSSS PGWRHLSQWY YLKRPARLAL LVVGFVAATI AARDRLSLVR DYEAEISRLD 60 EEVNRLHDQL RMAGIYLDES PNIENIIKKH HLEIDHVNNA RREKVKEAML HAWNSYVKYA 120 WGHDELQPQS KNGVNSFGGL GATLVDSLDT LYIMGLKEEF KKARDWVAES LDFDKDYEAS 180 VFETTIRVVG GLLSAYDLSA DKIFLEKARD ITDRLLPAWD TSSGIPYNRI NLAQGKASNP 240 GWNGGNSILA DSGTEQLEFI ALSQRTGDQK YQQKVENVIR QFQKIFPSDG LLPININPHS 300 GAVKSYSTIT FGAMGDSFYE YLLKVWIQGN KTESVKHYRQ MWETSMEGLL SLTRKTSPSN 360 FYYVCEKNGD SLSEKMDELA CFVPGMLALG ASGYSPEKAE QIMNLAEELA WTCYNFYQST 420 PTKLAGENYY FHGGQDMVVG TSWNILRPET IESLMYLWRL TGNKTYQDWG WDIFQAFEKN 480 SRIESGYVGL KDVNTGTKDD MMQSFFLAET LKYLYLLFSP PSLISFDEWV FNTEAHPLKI 540 VTRHDNEGGS GGGEGKGIAD SKIQPQGRKH GKPE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01532 | Glyco_hydro_47 | 0 | 108 | 540 | 452 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
PTZ00470 | PTZ00470 | 0 | 78 | 540 | 474 | + glycoside hydrolase family 47 protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34773.1 | 0 | 1 | 574 | 1 | 565 | unknown [Zea mays] |
EMBL | CAH66776.1 | 0 | 12 | 574 | 14 | 572 | OSIGBa0113I13.2 [Oryza sativa (indica cultivar-group)] |
EMBL | CBI18472.1 | 0 | 8 | 572 | 6 | 571 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001053800.1 | 0 | 12 | 574 | 14 | 572 | Os04g0606400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448484.1 | 0 | 1 | 574 | 1 | 564 | hypothetical protein SORBIDRAFT_06g027810 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fmi_A | 0 | 99 | 542 | 8 | 458 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 99 | 542 | 8 | 458 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 99 | 542 | 8 | 458 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 99 | 542 | 86 | 536 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1nxc_A | 0 | 95 | 547 | 14 | 472 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO780776 | 508 | 20 | 507 | 0 |
GO877285 | 309 | 156 | 464 | 0 |
HO780776 | 49 | 497 | 545 | 0.00000000000003 |
GO877285 | 19 | 462 | 480 | 0.00004 |
GO877285 | 17 | 479 | 495 | 0.00004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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