| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10033622 |
| Family | GT30 |
| Protein Properties | Length: 419 Molecular Weight: 46182 Isoelectric Point: 9.9779 |
| Chromosome | Chromosome/Scaffold: 701 Start: 844592 End: 847124 |
| Description | KDO transferase A |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT30 | 42 | 157 | 3.50044e-42 |
| RWPERLGRASLARPPGPLVWFHAVSLGEGMAAIPVIKQCVHRRPDLIVLMTTTTASAFKVIENDIPNGVLYQFCPVDTPAAMDAFLSYWKPTAIILLESE LWPNLIMGSSAMGVGL | |||
| Full Sequence |
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| Protein Sequence Length: 419 Download |
| MAAAGNGLLF YKIYRALTYT PSPIVHLHLR WRKLRGIEHP TRWPERLGRA SLARPPGPLV 60 WFHAVSLGEG MAAIPVIKQC VHRRPDLIVL MTTTTASAFK VIENDIPNGV LYQFCPVDTP 120 AAMDAFLSYW KPTAIILLES ELWPNLIMGS SAMGVGLAFP LISLMLSKFS LIVPLSTIQA 180 IQYQLLQAPP FVINFAGDLK YVVEHNAAKK NTTSTDDLKE QLSNRHVWMA ASIHRGEEQV 240 MLAVHLSLVR RYPDLLTIVV PRHPQHASEL VKRLQKEGHR VVLRSRKTKI TARDAIFVVD 300 TLGELRHLYS LTPIAVIGGS FCPDFAGHNI SEAAAAGCAV LTGVHVGHFA HMINQMRRLD 360 PSSIVQVSGE AELEEALVKL FSDAKVLAAR RRASKQALDA LSTGVVANVW NLVNTHVL* 420 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04413 | Glycos_transf_N | 3.0e-41 | 39 | 201 | 182 | + 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family. | ||
| COG1519 | KdtA | 4.0e-84 | 14 | 417 | 429 | + 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | ||
| PRK05749 | PRK05749 | 1.0e-93 | 9 | 393 | 407 | + 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016740 | transferase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABE80128.2 | 0 | 7 | 399 | 4 | 416 | Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal [Medicago truncatula] |
| EMBL | CBI30224.1 | 0 | 6 | 366 | 5 | 385 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277784.1 | 0 | 6 | 418 | 5 | 436 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322900.1 | 0 | 4 | 418 | 5 | 438 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528642.1 | 0 | 2 | 418 | 5 | 440 | 3-deoxy-d-manno-octulosonic-acid transferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xcu_D | 6e-24 | 49 | 393 | 33 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 2xcu_C | 6e-24 | 49 | 393 | 33 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 2xcu_B | 6e-24 | 49 | 393 | 33 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 2xcu_A | 6e-24 | 49 | 393 | 33 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 2xci_D | 6e-24 | 49 | 393 | 33 | 356 | A Chain A, Membrane-Embedded Monofunctional Glycosyltransferase Waaa Of Aquifex Aeolicus, Substrate-Free Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY266328 | 360 | 9 | 349 | 0 |
| DY279419 | 386 | 30 | 396 | 0 |
| DY288817 | 352 | 9 | 341 | 0 |
| FC917851 | 311 | 30 | 321 | 0 |
| FC901247 | 304 | 9 | 293 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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