| Basic Information | |
|---|---|
| Species | Prunus persica |
| Cazyme ID | ppa025343m |
| Family | GT30 |
| Protein Properties | Length: 443 Molecular Weight: 49318.8 Isoelectric Point: 9.8919 |
| Chromosome | Chromosome/Scaffold: 7 Start: 14786285 End: 14791071 |
| Description | KDO transferase A |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT30 | 41 | 220 | 0 |
| RWPERLGRPSLPRPPGQLLWIHAVSLGEGMAAIPVIKQCIQRRPDLTILMTTTTSSAFEVIEKRLPTGVIHQFAPVDTPSAMDSFLGHWKPNAIVIMESE LWPNLIMGASERGITLALLNARVSTKSFKRWSGPLLLPLVSLMLSKFSLIVPLSNMQAIHFQLLHAPPFVINFSGDLKYV | |||
| Full Sequence |
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| Protein Sequence Length: 443 Download |
| MAATKSKAVY NVYRALSHGL SPLLYLHLHW RKLRGLEHPL RWPERLGRPS LPRPPGQLLW 60 IHAVSLGEGM AAIPVIKQCI QRRPDLTILM TTTTSSAFEV IEKRLPTGVI HQFAPVDTPS 120 AMDSFLGHWK PNAIVIMESE LWPNLIMGAS ERGITLALLN ARVSTKSFKR WSGPLLLPLV 180 SLMLSKFSLI VPLSNMQAIH FQLLHAPPFV INFSGDLKYV VEEFDISEGE IRSIEDLKVH 240 LAHRKVWMAS SIHKGEEEVI LGIHKVLMQQ YPDVLTIIVP RHPQHGKEIA QQLWKEGHSV 300 ALRSQHDKLV GDTNLYVVDT LGELKHLYRL TPVAVIGGSF LPTLSGHNIS EAAAAGCAVL 360 TGPYVGHFSR MVLEMQRLNP LSVLQVSGKI ELEDALKKLF SDAKILEAHR TAAKQVYHSL 420 STGIVGKVWS LLDFQILQRA LS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04413 | Glycos_transf_N | 5.0e-53 | 60 | 219 | 160 | + 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family. | ||
| COG1519 | KdtA | 3.0e-104 | 11 | 436 | 431 | + 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | ||
| PRK05749 | PRK05749 | 7.0e-113 | 12 | 439 | 433 | + 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016740 | transferase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABE80128.2 | 0 | 8 | 417 | 6 | 415 | Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal [Medicago truncatula] |
| EMBL | CBI30224.1 | 0 | 1 | 385 | 1 | 385 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277784.1 | 0 | 1 | 442 | 1 | 441 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322900.1 | 0 | 1 | 441 | 3 | 442 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528642.1 | 0 | 2 | 438 | 6 | 441 | 3-deoxy-d-manno-octulosonic-acid transferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xcu_D | 6e-24 | 48 | 364 | 33 | 310 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2xcu_C | 6e-24 | 48 | 364 | 33 | 310 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2xcu_B | 6e-24 | 48 | 364 | 33 | 310 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2xcu_A | 6e-24 | 48 | 364 | 33 | 310 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2xci_D | 6e-24 | 48 | 364 | 33 | 310 | A Chain A, Membrane-Embedded Monofunctional Glycosyltransferase Waaa Of Aquifex Aeolicus, Substrate-Free Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY266328 | 360 | 9 | 368 | 0 |
| DY279419 | 395 | 30 | 423 | 0 |
| DY288817 | 403 | 9 | 410 | 0 |
| FC917851 | 311 | 30 | 340 | 0 |
| DY272481 | 326 | 9 | 334 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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