dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Gene Cluster: MGYG000000013_8|CGC3

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily | Substrate predicted by dbCAN-PUL search | Genomic context

CGC gene composition diagram

Gene detail information of MGYG000000013_03442

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03442
Location and strand information: 279906 - 282374 (+)
Family: CBM13|GH95|CBM2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8626
Protein molecular weight: 92585.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03443

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03443
Location and strand information: 282388 - 283593 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 6.0843
Protein molecular weight: 45825.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03444

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03444
Location and strand information: 283710 - 285176 (+)
Family: GH140
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3102
Protein molecular weight: 56882.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03445

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03445
Location and strand information: 285295 - 289161 (+)
Family: GH33|GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.2305
Protein molecular weight: 145627.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03446

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03446
Location and strand information: 289273 - 290160 (+)
Family: null
Protein type: null
Protein description: Dihydroanticapsin 7-dehydrogenase

Gene detail information of MGYG000000013_03447

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03447
Location and strand information: 290259 - 291038 (-)
Family: null
Protein type: null
Protein description: putative NTE family protein

Gene detail information of MGYG000000013_03448

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03448
Location and strand information: 291268 - 293232 (-)
Family: CE19|CE0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.8875
Protein molecular weight: 73705.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03449

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03449
Location and strand information: 293289 - 294623 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.912
Protein molecular weight: 49294.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03450

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03450
Location and strand information: 294718 - 297540 (-)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0626
Protein molecular weight: 106590.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03451

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03451
Location and strand information: 297663 - 300983 (-)
Family: GH143|GH142
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2483
Protein molecular weight: 127081.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03452

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03452
Location and strand information: 301016 - 301939 (-)
Family: GH43_18|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8413
Protein molecular weight: 35262.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03453

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03453
Location and strand information: 302145 - 302813 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene detail information of MGYG000000013_03454

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03454
Location and strand information: 302874 - 304613 (-)
Family: PL1|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3272
Protein molecular weight: 64518.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03455

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03455
Location and strand information: 304791 - 306974 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene detail information of MGYG000000013_03456

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03456
Location and strand information: 306989 - 310309 (-)
Family: 1.B.14.6.2
Protein type: TC
Protein description: hypothetical protein

Gene detail information of MGYG000000013_03457

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03457
Location and strand information: 310350 - 311771 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene detail information of MGYG000000013_03458

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03458
Location and strand information: 311949 - 312842 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene detail information of MGYG000000013_03459

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03459
Location and strand information: 313137 - 315410 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.582
Protein molecular weight: 86724.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03460

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03460
Location and strand information: 315418 - 316386 (-)
Family: GH130
Protein type: CAZyme
Protein description: 1,4-beta-mannosyl-N-acetylglucosamine phosphorylase
Protein isoelectric point: 5.6011
Protein molecular weight: 36799.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03461

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03461
Location and strand information: 316407 - 317732 (-)
Family: null
Protein type: null
Protein description: Protein AmpG

Gene detail information of MGYG000000013_03462

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03462
Location and strand information: 317831 - 320014 (-)
Family: GH163
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8087
Protein molecular weight: 83175.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of MGYG000000013_03463

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03463
Location and strand information: 320173 - 321306 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene detail information of MGYG000000013_03464

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03464
Location and strand information: 321338 - 322474 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene detail information of MGYG000000013_03465

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03465
Location and strand information: 322500 - 324071 (-)
Family: 8.A.46.2.1
Protein type: TC
Protein description: hypothetical protein

Gene detail information of MGYG000000013_03466

Gene clsuter ID: MGYG000000013_8|CGC3
Gene ID: MGYG000000013_03466
Location and strand information: 324086 - 326896 (-)
Family: 1.B.14.6.13
Protein type: TC
Protein description: hypothetical protein

Gene composition table

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Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000013_03442	hypothetical protein	CAZyme	279906	282374	+	CBM13\| GH95\| CBM2
MGYG000000013_03443	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	282388	283593	+	GH105
MGYG000000013_03444	hypothetical protein	CAZyme	283710	285176	+	GH140
MGYG000000013_03445	hypothetical protein	CAZyme	285295	289161	+	GH33\| GH78\| CBM67
MGYG000000013_03446	Dihydroanticapsin 7-dehydrogenase	null	289273	290160	+	adh_short_C2
MGYG000000013_03447	putative NTE family protein	null	290259	291038	-	Patatin
MGYG000000013_03448	hypothetical protein	CAZyme	291268	293232	-	CE19\| CE0
MGYG000000013_03449	hypothetical protein	CAZyme	293289	294623	-	GH28
MGYG000000013_03450	hypothetical protein	CAZyme	294718	297540	-	CBM67\| GH78
MGYG000000013_03451	hypothetical protein	CAZyme	297663	300983	-	GH143\| GH142
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Showing 1 to 10 of 25 entries

Substrate predicted by eCAMI subfamilies is pectin

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Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000013_03442	GH95_e0\|CBM2_e92\|CBM13_e181\|3.2.1.-	xylan\|pectin
MGYG000000013_03443	GH105_e23\|3.2.1.-	pectin
MGYG000000013_03444	GH140_e1\|3.2.1.-	pectin
MGYG000000013_03445	GH78_e32\|GH33_e8\|CBM67_e6\|3.2.1.40\|3.2.1.-	pectin\|alpha-rhamnoside
MGYG000000013_03448	CE0_e11
MGYG000000013_03449	GH28_e11
MGYG000000013_03450	GH78_e41\|3.2.1.40	alpha-rhamnoside
MGYG000000013_03451	GH143_e0\|GH142_e0
MGYG000000013_03452	GH43_e130\|3.2.1.55	xylan
MGYG000000013_03454	PL1_e27

Showing 1 to 10 of 13 entries

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

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