Statistics on HUMAN GUT
General Statistics
You are browserling the dbCAN-seq database: HUMAN GUT.
Currently the database contains:
| Total number of genes | 10231988 | Total number of CAZymes | 261386 |
| Total number of CGCs | 94276 |
| Number of annotated CGCs (with substrate) | 26912 |
| Number of CGCs annotated by dbCAN-PUL search (with substrate) | 26827 |
| Number of CGCs annotated by eCAMI sub-family (with substrate) | 3720 |
| Number of substrates | 35 |
| Number of phyla | 24 |
| Number of genomes | 4744 |
| Number of homologous PULs in dbCAN-PUL | 417 |
| Number of genes in CGCs | 522733 | ||
| Number of CAZymes in CGCs | 146039 | Number of CAZymes in annotated CGGs (with substrate) | 66413 |
| Number of TCs in CGCs | 220728 | Number of TCs in annotated CGGs (with substrate) | 85906 |
| Number of TFs in CGCs | 20225 | Number of TFs in annotated CGGs (with substrate) | 11868 |
| Number of STPs in CGCs | 17689 | Number of STPs in annotated CGGs (with substrate) | 7619 |
| Number of null genes in CGCs | 118052 | Number of null in annotated CGGs (with substrate) | 44686 |
| by dbCAN-PUL search | by eCAMI sub-family | |
|---|---|---|
| Number of CAZymes in CGCs | 65545 | 15089 |
| Number of TC in CGCs | 85143 | 11502 |
| Number of TF in CGCs | 11801 | 2752 |
| Number of STP in CGCs | 7555 | 968 |
| Number of null in CGCs | 44224 | 7347 |
| # of MAGs containing CAZyme | 4741 |
| # of MAGs containing CGC | 4688 |
| # of MAGs containing CGC annotated by dbCAN-PUL search | 3841 |
| # of MAGs containing CGC annotated by eCAMI sub-family | 1611 |
Distribution of CGCs according to substrate predicted by dbCAN-PUL search
Distribution of CGCs by substrate predicted by eCAMI sub-family
Counts of CGCs with the plotted PUL as the best hit from dbCAN-PUL
Counts of CGC-encoding MAGs in each phylum