dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02033
Location and strand information: 3064 - 4260 (-)
Family: CE0|CBM48|CE1
Protein type: CAZyme
Protein description: Carbohydrate acetyl esterase/feruloyl esterase
Protein isoelectric point: 6.0114
Protein molecular weight: 45324.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02034
Location and strand information: 4390 - 6846 (+)
Family: 1.B.14.8.2
Protein type: TC
Protein description: Vitamin B12 transporter BtuB

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02035
Location and strand information: 7071 - 9080 (-)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 5.9734
Protein molecular weight: 76641.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02036
Location and strand information: 9073 - 10050 (-)
Family: GH43_1|GH43
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.9247
Protein molecular weight: 37057.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02037
Location and strand information: 10099 - 11247 (-)
Family: GH10|3.2.1.8
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase A
Protein isoelectric point: 6.9605
Protein molecular weight: 43505.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02038
Location and strand information: 11267 - 12763 (-)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02039
Location and strand information: 12766 - 14397 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02040
Location and strand information: 14745 - 18839 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02041
Location and strand information: 18894 - 19760 (-)
Family: CE1|CE6
Protein type: CAZyme
Protein description: Carbohydrate acetyl esterase/feruloyl esterase
Protein isoelectric point: 5.1884
Protein molecular weight: 31440.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02042
Location and strand information: 19809 - 22307 (-)
Family: GH31
Protein type: CAZyme
Protein description: Alpha-xylosidase BoGH31A
Protein isoelectric point: 6.6463
Protein molecular weight: 93846.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02043
Location and strand information: 22348 - 22482 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02044
Location and strand information: 22494 - 23903 (-)
Family: CBM6|GH43|CBM13|CBM2|CBM42|GH43_29|CBM22
Protein type: CAZyme
Protein description: Arabinoxylan arabinofuranohydrolase
Protein isoelectric point: 6.5035
Protein molecular weight: 52734.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02045
Location and strand information: 23908 - 26298 (-)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.359
Protein molecular weight: 91767.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02046
Location and strand information: 26340 - 27674 (-)
Family: GH43_29|CBM6|GH43
Protein type: CAZyme
Protein description: Arabinoxylan arabinofuranohydrolase
Protein isoelectric point: 5.0234
Protein molecular weight: 50768.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02047
Location and strand information: 27712 - 29430 (-)
Family: GH43_29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2873
Protein molecular weight: 64466.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02048
Location and strand information: 29450 - 30835 (-)
Family: GH43_29|CBM6|CBM22|GH43
Protein type: CAZyme
Protein description: Arabinoxylan arabinofuranohydrolase
Protein isoelectric point: 5.4657
Protein molecular weight: 51666.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02049
Location and strand information: 30852 - 32813 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.1165
Protein molecular weight: 72107.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02050
Location and strand information: 32882 - 34918 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02051
Location and strand information: 35060 - 37465 (-)
Family: GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3379
Protein molecular weight: 90954.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02052
Location and strand information: 37484 - 39091 (-)
Family: GH43|GH43_10
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 6.1931
Protein molecular weight: 60650.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02053
Location and strand information: 39128 - 41578 (-)
Family: CBM51|GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5062
Protein molecular weight: 91291.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02054
Location and strand information: 41585 - 42457 (-)
Family: CE1
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase Z
Protein isoelectric point: 6.159
Protein molecular weight: 33143.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02055
Location and strand information: 42804 - 44516 (+)
Family: GH43_12|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 5.7077
Protein molecular weight: 63106.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02056
Location and strand information: 44614 - 47115 (-)
Family: CBM6|GH43_2|GH8|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.547
Protein molecular weight: 95603.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02057
Location and strand information: 47203 - 49002 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000043_21|CGC1
Gene ID: MGYG000000043_02058
Location and strand information: 49048 - 52188 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000043_02033	Carbohydrate acetyl esterase/feruloyl esterase	CAZyme	3064	4260	-	CE0\| CBM48\| CE1
MGYG000000043_02034	Vitamin B12 transporter BtuB	TC	4390	6846	+	1.B.14.8.2
MGYG000000043_02035	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	7071	9080	-	GH67
MGYG000000043_02036	Xylosidase/arabinosidase	CAZyme	9073	10050	-	GH43_1\| GH43
MGYG000000043_02037	Endo-1,4-beta-xylanase A	CAZyme	10099	11247	-	GH10\| 3.2.1.8
MGYG000000043_02038	Inner membrane symporter YicJ	TC	11267	12763	-	2.A.2.3.4
MGYG000000043_02039	hypothetical protein	null	12766	14397	-	SASA\| Glyco_hydro_2_N\| SASA
MGYG000000043_02040	Sensor histidine kinase RcsC	TF	14745	18839	+	HTH_AraC
MGYG000000043_02041	Carbohydrate acetyl esterase/feruloyl esterase	CAZyme	18894	19760	-	CE1\| CE6
MGYG000000043_02042	Alpha-xylosidase BoGH31A	CAZyme	19809	22307	-	GH31
MGYG000000043_02043	hypothetical protein	null	22348	22482	-	No domain
MGYG000000043_02044	Arabinoxylan arabinofuranohydrolase	CAZyme	22494	23903	-	CBM6\| GH43\| CBM13\| CBM2\| CBM42\| GH43_29\| CBM22
MGYG000000043_02045	hypothetical protein	CAZyme	23908	26298	-	GH31
MGYG000000043_02046	Arabinoxylan arabinofuranohydrolase	CAZyme	26340	27674	-	GH43_29\| CBM6\| GH43
MGYG000000043_02047	hypothetical protein	CAZyme	27712	29430	-	GH43_29
MGYG000000043_02048	Arabinoxylan arabinofuranohydrolase	CAZyme	29450	30835	-	GH43_29\| CBM6\| CBM22\| GH43
MGYG000000043_02049	Retaining alpha-galactosidase	CAZyme	30852	32813	-	GH97
MGYG000000043_02050	hypothetical protein	null	32882	34918	-	Thioredoxin_8
MGYG000000043_02051	hypothetical protein	CAZyme	35060	37465	-	GH146
MGYG000000043_02052	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	37484	39091	-	GH43\| GH43_10
MGYG000000043_02053	hypothetical protein	CAZyme	39128	41578	-	CBM51\| GH95
MGYG000000043_02054	Endo-1,4-beta-xylanase Z	CAZyme	41585	42457	-	CE1
MGYG000000043_02055	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	42804	44516	+	GH43_12\| GH43
MGYG000000043_02056	hypothetical protein	CAZyme	44614	47115	-	CBM6\| GH43_2\| GH8\| GH43
MGYG000000043_02057	hypothetical protein	null	47203	49002	-	SusD-like_3\| SusD_RagB
MGYG000000043_02058	hypothetical protein	TC	49048	52188	-	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000043_02033	CE1_e62\|CBM48_e61
MGYG000000043_02035	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan
MGYG000000043_02036	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000000043_02037	GH10_e61
MGYG000000043_02041	CE6_e7\|CE1_e61\|3.1.1.72	xylan
MGYG000000043_02042	GH31_e75
MGYG000000043_02044	GH43_e167\|CBM6_e17\|CBM42_e14\|CBM2_e92\|CBM22_e12\|CBM13_e49\|3.2.1.8\|3.2.1.55\|3.2.1.37	xylan
MGYG000000043_02045	GH31_e48
MGYG000000043_02046	GH43_e137\|CBM6_e17\|3.2.1.8\|3.2.1.55\|3.2.1.37	xylan
MGYG000000043_02047
MGYG000000043_02048	GH43_e167\|CBM22_e12\|3.2.1.55\|3.2.1.37	xylan
MGYG000000043_02049	GH97_e10\|3.2.1.88\|3.2.1.22	alpha-glucan
MGYG000000043_02051	GH146_e10\|3.2.1.185	arabinan
MGYG000000043_02052	GH43_e221\|3.2.1.55	xylan
MGYG000000043_02053	GH95_e0\|CBM51_e13\|3.2.1.63\|3.2.1.-	xylan\|pectin
MGYG000000043_02054	CE1_e69
MGYG000000043_02055	GH43_e65\|3.2.1.8\|3.2.1.55	xylan
MGYG000000043_02056	GH8_e33\|GH43_e168\|CBM6_e28\|3.2.1.156	xylan