logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000000054_12|CGC2

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000000054_01441
hypothetical protein
TC 69468 71102 - 1.B.9.4.2
MGYG000000054_01442
hypothetical protein
null 71133 72446 - No domain
MGYG000000054_01443
Ribosomal protein L11 methyltransferase
null 72599 73447 + PrmA
MGYG000000054_01444
hypothetical protein
CAZyme 73612 74508 - GH25
MGYG000000054_01445
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase
null 74689 76335 - PFK
MGYG000000054_01446
ATP-dependent RecD-like DNA helicase
TC 76584 78851 + 3.A.7.16.1
MGYG000000054_01447
hypothetical protein
null 78875 80038 - DUF5128
MGYG000000054_01448
Outer membrane protein OprM
TC 80627 82000 - 2.A.6.2.46
MGYG000000054_01449
Efflux pump membrane transporter BepE
TC 81997 85104 - 2.A.6.2.22
MGYG000000054_01450
Efflux pump periplasmic linker BepF
TC 85108 86364 - 2.A.6.2.41
MGYG000000054_01451
hypothetical protein
null 86633 88849 + Patatin| Omp85_2
MGYG000000054_01452
hypothetical protein
CAZyme 89022 91370 - CBM32| GH35
MGYG000000054_01453
hypothetical protein
CAZyme 91697 92695 - GH28
MGYG000000054_01454
hypothetical protein
null 92695 93057 - Pectate_lyase_3
MGYG000000054_01455
hypothetical protein
CAZyme 93058 94326 - GH154
MGYG000000054_01456
Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme 94342 95514 - GH105
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000000054_01444 GH25_e151
MGYG000000054_01452 GH35_e29|CBM32_e73
MGYG000000054_01453 GH28_e36|3.2.1.67|3.2.1.- pectin
MGYG000000054_01455
MGYG000000054_01456 GH105_e2|3.2.1.- pectin

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location