logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000000054_13|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Created with SnapCAZymeTCnull9720115261333315140169461875320560223662417325980

Gene composition table

Protein IDProtein NameTypeStartEndStrandSignature
MGYG000000054_01469
1,4-alpha-glucan branching enzyme GlgB
CAZyme 9720 11573 + GH13
MGYG000000054_01470
Glucan 1,4-alpha-glucosidase SusB
CAZyme 11771 13981 + GH97
MGYG000000054_01471
TonB-dependent receptor SusC
TC 14149 17160 + 1.B.14.6.1
MGYG000000054_01472
Starch-binding protein SusD
TC 17182 18837 + 8.A.46.1.1
MGYG000000054_01473
Outer membrane protein SusE
null 18872 20035 + SusE| SusF_SusE
MGYG000000054_01474
Outer membrane protein SusF
null 20060 21517 + DUF5115| SusF_SusE
MGYG000000054_01475
Alpha-amylase SusG
CAZyme 21627 23705 + GH13_36| GH13| CBM58
MGYG000000054_01476
UDP-2,3-diacylglucosamine hydrolase
null 23848 24612 - Metallophos
MGYG000000054_01477
Fe-S protein maturation auxiliary factor SufT
null 24658 24969 - FeS_assembly_P
MGYG000000054_01478
Beta-galactosidase
CAZyme 25130 27787 - GH2
Protein IDProtein NameTypeStartEndStrandSignature
Showing 1 to 10 of 10 entries

Substrate predicted by eCAMI subfamilies is starch

Substrate predicted by dbCAN-PUL is starch download this fig


Genomic location

1,990 Pageviews
Mar. 06th - Apr. 06th